HL_5LKS_139

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUGGCGUUCAGCCAC

Length

15 nucleotides

Bulged bases

5LKS|1|S2|U|1463

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|S2|G|1456
5LKS|1|S2|U|1457
5LKS|1|S2|G|1458
5LKS|1|S2|G|1459
5LKS|1|S2|C|1460
5LKS|1|S2|G|1461
5LKS|1|S2|U|1462
5LKS|1|S2|U|1463
5LKS|1|S2|C|1464
5LKS|1|S2|A|1465
5LKS|1|S2|G|1466
5LKS|1|S2|C|1467
5LKS|1|S2|C|1468
5LKS|1|S2|A|1469
5LKS|1|S2|C|1470

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SF

40S ribosomal protein S5

Chain SR

40S ribosomal protein S17

Chain Sc

40S ribosomal protein S28

Chain Sg

Receptor of activated protein C kinase 1