HL_5LKS_140

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUAGGUGAACCUGC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|S2|G|1843
5LKS|1|S2|U|1844
5LKS|1|S2|A|1845
5LKS|1|S2|G|1846
5LKS|1|S2|G|1847
5LKS|1|S2|U|1848
5LKS|1|S2|G|1849
5LKS|1|S2|A|1850
5LKS|1|S2|A|1851
5LKS|1|S2|C|1852
5LKS|1|S2|C|1853
5LKS|1|S2|U|1854
5LKS|1|S2|G|1855
5LKS|1|S2|C|1856

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain L5

Large subunit ribosomal RNA; LSU rRNA

Chain Ln

60S ribosomal protein L41

Chain SO

40S ribosomal protein S14

Chain Sa

40S ribosomal protein S26