HL_5LKS_143

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGGACUGUCCCCAGUGCG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|C|1172
5LKS|1|L5|G|1173
5LKS|1|L5|G|1174
5LKS|1|L5|A|1175
5LKS|1|L5|C|1176
5LKS|1|L5|U|1177
5LKS|1|L5|G|1178
5LKS|1|L5|U|1179
5LKS|1|L5|C|1180
5LKS|1|L5|C|1181
5LKS|1|L5|C|1182
5LKS|1|L5|C|1183
5LKS|1|L5|A|1184
5LKS|1|L5|G|1185
5LKS|1|L5|U|1186
5LKS|1|L5|G|1187
5LKS|1|L5|C|1188
5LKS|1|L5|G|1189

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain L7

5S ribosomal RNA; 5S rRNA

Chain LD

60S ribosomal protein L5

Chain LI

60S ribosomal protein L10-like