HL_5LMV_026
3D structure
- PDB id
- 5LMV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of bacterial 30S-IF1-IF2-IF3-mRNA-tRNA translation pre-initiation complex(state-III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.9 Å
Loop
- Sequence
- GUUCGGC
- Length
- 7 nucleotides
- Bulged bases
- 5LMV|1|A|U|1136
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5LMV_026 not in the Motif Atlas
- Homologous match to HL_6CZR_097
- Geometric discrepancy: 0.3064
- The information below is about HL_6CZR_097
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LMV|1|A|G|1134
5LMV|1|A|U|1135
5LMV|1|A|U|1136
5LMV|1|A|C|1137
5LMV|1|A|G|1138
5LMV|1|A|G|1139
5LMV|1|A|C|1140
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain I
- 30S ribosomal protein S9
Coloring options: