HL_5LZC_046
3D structure
- PDB id
- 5LZC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- G(PSU)AAC(3TD)A(PSU)AAC
- Length
- 11 nucleotides
- Bulged bases
- 5LZC|1|A|A|1913, 5LZC|1|A|C|1914
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5LZC_046 not in the Motif Atlas
- Homologous match to HL_5J7L_181
- Geometric discrepancy: 0.1067
- The information below is about HL_5J7L_181
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25847.2
- Basepair signature
- cWW-F-cSH-tHW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
5LZC|1|A|G|1910
5LZC|1|A|PSU|1911
5LZC|1|A|A|1912
5LZC|1|A|A|1913
5LZC|1|A|C|1914
5LZC|1|A|3TD|1915
5LZC|1|A|A|1916
5LZC|1|A|PSU|1917
5LZC|1|A|A|1918
5LZC|1|A|A|1919
5LZC|1|A|C|1920
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain v
- Transfer RNA; tRNA
- Chain y
- Selenocysteine transfer RNA
Coloring options: