HL_5LZC_119

3D structure

PDB id

5LZC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

UUUA

Length

4 nucleotides

Bulged bases

5LZC|1|A|U|2797

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5LZC_119 not in the Motif Atlas

Geometric match to HL_7D3J_001

Geometric discrepancy: 0.2634

The information below is about HL_7D3J_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

5LZC|1|A|U|2796
5LZC|1|A|U|2797
5LZC|1|A|U|2798
5LZC|1|A|A|2799

Current chains

Chain A

23S ribosomal RNA

Nearby chains