HL_5LZE_024

3D structure

PDB id

5LZE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UCACGA

Length

6 nucleotides

Bulged bases

5LZE|1|A|C|890

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5LZE_024 not in the Motif Atlas

Homologous match to HL_5J7L_158

Geometric discrepancy: 0.5211

The information below is about HL_5J7L_158

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZE|1|A|U|884
5LZE|1|A|C|885
5LZE|1|A|A|886
5LZE|1|A|C|890
5LZE|1|A|G|891
5LZE|1|A|A|892

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain m

30S ribosomal protein S13