5LZE Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info | 
|---|---|---|---|---|
| HL_5LZE_001 | 1/A/59:68 | No text annotation | homologous HL_5J7L_134 NA  | |
| HL_5LZE_002 | 1/A/87:95 | No text annotation | homologous HL_5J7L_135 NA  | |
| HL_5LZE_003 | 1/A/123:128 | No text annotation | homologous HL_4WF9_003 HL_75660.7  | |
| HL_5LZE_005 | 1/A/158:168 | No text annotation | homologous HL_5J7L_138 NA  | |
| HL_5LZE_006 | 1/A/194:201 | No text annotation | homologous HL_5J7L_139 NA  | |
| HL_5LZE_007 | 1/A/225:230 | No text annotation | homologous HL_5J7L_140 NA  | |
| HL_5LZE_008 | 1/A/246:252 | No text annotation | homologous HL_5J7L_141 NA  | |
| HL_5LZE_009 | 1/A/305:312 | T-loop with 2 stacked bulged bases | homologous HL_5J7L_142 NA  | |
| HL_5LZE_010 | 1/A/327:335 | T-loop with unstacked turn | homologous HL_5J7L_144 NA  | |
| HL_5LZE_011 | 1/A/382:392 | No text annotation | homologous HL_5J7L_145 NA  | |
| HL_5LZE_012 | 1/A/410:417 | Pseudoknot geometry | homologous HL_5J7L_146 NA  | |
| HL_5LZE_013 | 1/A/462:467 | GNRA | homologous HL_4WF9_015 HL_34789.3  | |
| HL_5LZE_014 | 1/A/487:493 | GNRA | homologous HL_5J7L_148 NA  | |
| HL_5LZE_016 | 1/A/566:575 | T-loop with 2 stacked bulged bases | geometric HL_5J7L_150 NA  | |
| HL_5LZE_017 | 1/A/611:617 | No text annotation | homologous HL_5J7L_151 NA  | |
| HL_5LZE_018 | 1/A/629:634 | GNRA | homologous HL_5J7L_152 NA  | |
| HL_5LZE_019 | 1/A/641:647 | No text annotation | homologous HL_5J7L_153 NA  | |
| HL_5LZE_020 | 1/A/712:719 | GNRA wlth tandem sheared | homologous HL_5J7L_154 NA  | |
| HL_5LZE_021 | 1/A/744:753 | No text annotation | homologous HL_5J7L_155 NA  | |
| HL_5LZE_022 | 1/A/779:785 | UNCG variation | homologous HL_7A0S_023 HL_51020.2  | |
| HL_5LZE_023 | 1/A/826:831 | No text annotation | homologous HL_7RQB_025 NA  | |
| HL_5LZE_110 | 1/A/955:962 | GNRA | homologous HL_5J7L_211 NA  | |
| HL_5LZE_026 | 1/A/978:985 | No text annotation | homologous HL_4WF9_028 HL_47171.1  | |
| HL_5LZE_111 | 1/A/1169:1180 | No text annotation | ||
| HL_5LZE_029 | 1/A/1222:1227 | GNRA | homologous HL_5J7L_164 NA  | |
| HL_5LZE_030 | 1/A/1281:1289 | T-loop with 2 stacked bulged bases | homologous HL_5J7L_165 NA  | |
| HL_5LZE_031 | 1/A/1324:1330 | Pseudoknot geometry with 3' bulge | homologous HL_5J7L_166 NA  | |
| HL_5LZE_032 | 1/A/1363:1368 | GNRA | homologous HL_5J7L_167 NA  | |
| HL_5LZE_033 | 1/A/1389:1398 | No text annotation | homologous HL_5J7L_168 NA  | |
| HL_5LZE_034 | 1/A/1451:1459 | Mini UNCG with extended bulge | homologous HL_5J7L_169 NA  | |
| HL_5LZE_035 | 1/A/1492:1498 | Pseudoknot geometry with 3' bulge | homologous HL_5J7L_170 NA  | |
| HL_5LZE_037 | 1/A/1565:1568 | Mini UNCG | homologous HL_7A0S_039 HL_90436.3  | |
| HL_5LZE_038 | 1/A/1612:1619 | No text annotation | homologous HL_5J7L_173 NA  | |
| HL_5LZE_039 | 1/A/1630:1636 | GNRA | homologous HL_5J7L_174 NA  | |
| HL_5LZE_040 | 1/A/1691:1696 | UNCG | geometric HL_4PMI_004 HL_61337.3  | |
| HL_5LZE_042 | 1/A/1752:1756 | No text annotation | homologous HL_5J7L_177 NA  | |
| HL_5LZE_043 | 1/A/1777:1787 | No text annotation | homologous HL_4WF9_043 HL_87681.1  | |
| HL_5LZE_044 | 1/A/1806:1811 | GNRA related | homologous HL_5J7L_179 NA  | |
| HL_5LZE_046 | 1/A/1910:1920 | No text annotation | homologous HL_5J7L_181 NA  | |
| HL_5LZE_047 | 1/A/1949:1957 | No text annotation | homologous HL_4WF9_046 HL_61418.2  | |
| HL_5LZE_048 | 1/A/2027:2036 | No text annotation | homologous HL_5J7L_183 NA  | |
| HL_5LZE_050 | 1/A/2209:2215 | No text annotation | homologous HL_5J7L_185 NA  | |
| HL_5LZE_051 | 1/A/2248:2256 | No text annotation | homologous HL_7A0S_052 HL_11974.2  | |
| HL_5LZE_052 | 1/A/2264:2276 | No text annotation | homologous HL_7RQB_054 NA  | |
| HL_5LZE_114 | 1/A/2304:2312 | No text annotation | homologous HL_9DFE_198 HL_02452.1  | |
| HL_5LZE_054 | 1/A/2324:2331 | Pseudoknot geometry | homologous HL_5J7L_189 NA  | |
| HL_5LZE_055 | 1/A/2356:2361 | GNRA | homologous HL_5J7L_190 NA  | |
| HL_5LZE_056 | 1/A/2374:2379 | GNRA | homologous HL_5J7L_191 NA  | |
| HL_5LZE_057 | 1/A/2404:2413 | No text annotation | homologous HL_5J7L_192 NA  | |
| HL_5LZE_058 | 1/A/2471:2479 | No text annotation | homologous HL_7RQB_060 NA  | |
| HL_5LZE_059 | 1/A/2528:2535 | GNRA variation | homologous HL_5J7L_194 NA  | |
| HL_5LZE_060 | 1/A/2551:2557 | No text annotation | homologous HL_5J7L_195 NA  | |
| HL_5LZE_061 | 1/A/2594:2599 | GNRA | homologous HL_7RQB_063 NA  | |
| HL_5LZE_062 | 1/A/2658:2663 | GNRA | homologous HL_7RQB_064 NA  | |
| HL_5LZE_063 | 1/A/2701:2706 | Ribsomal LSU H95 | homologous HL_5J7L_198 NA  | |
| HL_5LZE_064 | 1/A/2745:2759 | No text annotation | homologous HL_5J7L_199 NA  | |
| HL_5LZE_066 | 1/A/2819:2827 | No text annotation | homologous HL_5J7L_201 NA  | |
| HL_5LZE_067 | 1/A/2856:2861 | GNRA | homologous HL_7A0S_068 HL_34789.3  | |
| HL_5LZE_068 | 1/B/38:44 | No text annotation | homologous HL_7RQB_070 NA  | |
| HL_5LZE_069 | 1/B/86:90 | Mini UNCG | homologous HL_5J7L_204 NA  | |
| HL_5LZE_070 | 1/a/12:22 | No text annotation | homologous HL_5J7L_001 NA  | |
| HL_5LZE_073 | 1/a/186:191 | GNRA | homologous HL_5J7L_004 NA  | |
| HL_5LZE_075 | 1/a/259:267 | GNRA related | homologous HL_5J7L_006 NA  | |
| HL_5LZE_076 | 1/a/296:301 | GNRA | homologous HL_4LFB_007 HL_34789.3  | |
| HL_5LZE_077 | 1/a/320:333 | No text annotation | homologous HL_6CZR_079 NA  | |
| HL_5LZE_078 | 1/a/342:347 | UNCG | homologous HL_4LFB_009 HL_61337.3  | |
| HL_5LZE_080 | 1/a/419:424 | UNCG | homologous HL_4LFB_011 HL_61337.3  | |
| HL_5LZE_112 | 1/a/522:527 | GNRA variation | homologous HL_5J7L_205 NA  | |
| HL_5LZE_083 | 1/a/617:623 | No text annotation | homologous HL_6CZR_085 NA  | |
| HL_5LZE_084 | 1/a/689:698 | No text annotation | homologous HL_5J7L_015 NA  | |
| HL_5LZE_085 | 1/a/726:731 | GNRA | homologous HL_5J7L_016 NA  | |
| HL_5LZE_086 | 1/a/786:796 | No text annotation | homologous HL_4LFB_017 HL_38491.2  | |
| HL_5LZE_088 | 1/a/862:867 | GNRA | homologous HL_5J7L_019 NA  | |
| HL_5LZE_089 | 1/a/897:902 | GNRA | homologous HL_4LFB_020 HL_34789.3  | |
| HL_5LZE_090 | 1/a/963:972 | No text annotation | homologous HL_5J7L_021 NA  | |
| HL_5LZE_091 | 1/a/1012:1017 | GNRA | homologous HL_4LFB_022 HL_34789.3  | |
| HL_5LZE_093 | 1/a/1076:1081 | GNRA | homologous HL_5J7L_023 NA  | |
| HL_5LZE_094 | 1/a/1089:1096 | T-loop related | homologous HL_4LFB_025 HL_63894.2  | |
| HL_5LZE_095 | 1/a/1134:1140 | No text annotation | homologous HL_6CZR_097 NA  | |
| HL_5LZE_096 | 1/a/1165:1171 | GNRA | homologous HL_4LFB_027 HL_34789.3  | |
| HL_5LZE_097 | 1/a/1265:1270 | GNRA | homologous HL_4LFB_028 HL_34789.3  | |
| HL_5LZE_098 | 1/a/1314:1323 | T-loop with 3 stacked bulged bases | homologous HL_4LFB_029 HL_93658.1  | |
| HL_5LZE_099 | 1/a/1356:1366 | No text annotation | homologous HL_4LFB_030 HL_86432.1  | |
| HL_5LZE_101 | 1/a/1515:1520 | GNRA | homologous HL_6CZR_103 NA  | |
| HL_5LZE_102 | 1/v/13:22 | tRNA D-loop | homologous HL_1QF6_001 HL_20490.1  | |
| HL_5LZE_103 | 1/v/31:39 | tRNA anticodon loop | homologous HL_6CFJ_107 HL_81376.3  | |
| HL_5LZE_104 | 1/v/53:61 | T-loop with 2 stacked bulged bases | homologous HL_6GSL_210 NA  | |
| HL_5LZE_106 | 1/y/15:20 | tRNA D-loop | homologous HL_3RG5_005 HL_18141.3  | |
| HL_5LZE_107 | 1/y/31:39 | tRNA anticodon loop | homologous HL_3W3S_002 HL_81376.3  | |
| HL_5LZE_109 | 1/y/53:61 | T-loop with 2 stacked bulged bases | homologous HL_3RG5_008 HL_33597.3  | 
Problematic loops
| # | loop id | Problem | Sequence | 
|---|---|---|---|
| HL_5LZE_004 | Externally structured | ||
| HL_5LZE_015 | No text annotation | ||
| HL_5LZE_113 | Mini UNCG with extended bulge | ||
| HL_5LZE_024 | No text annotation | ||
| HL_5LZE_025 | No text annotation | ||
| HL_5LZE_027 | GNRA wlth tandem sheared | ||
| HL_5LZE_028 | No text annotation | ||
| HL_5LZE_036 | UNCG | ||
| HL_5LZE_041 | Mini UNCG | ||
| HL_5LZE_045 | GNRA variation | ||
| HL_5LZE_049 | No text annotation | ||
| HL_5LZE_053 | No text annotation | ||
| HL_5LZE_065 | UNCG variation | ||
| HL_5LZE_071 | No text annotation | ||
| HL_5LZE_072 | GNRA with extra cWW | ||
| HL_5LZE_074 | No text annotation | ||
| HL_5LZE_079 | GNRA | ||
| HL_5LZE_081 | GNRA wlth extra near cWW | ||
| HL_5LZE_082 | No text annotation | ||
| HL_5LZE_087 | Externally structured | ||
| HL_5LZE_092 | No text annotation | ||
| HL_5LZE_100 | UNCG | ||
| HL_5LZE_105 | No text annotation | ||
| HL_5LZE_108 | No text annotation | 
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info | 
|---|---|---|---|---|
| IL_5LZE_001 | 1/A/24:30, 1/A/510:516  | Triple sheared with non-canonical cWW | geometric IL_7A0S_001 IL_22311.1  | |
| IL_5LZE_002 | 1/A/36:37, 1/A/442:444  | Single bulged A | homologous IL_7RQB_002 NA  | |
| IL_5LZE_003 | 1/A/43:44, 1/A/434:436  | Minor groove platform | homologous IL_7RQB_003 NA  | |
| IL_5LZE_004 | 1/A/81:85, 1/A/97:105  | No text annotation | homologous IL_5J7L_248 NA  | |
| IL_5LZE_005 | 1/A/183:184, 1/A/212:214  | Single stack bend | homologous IL_5J7L_249 NA  | |
| IL_5LZE_006 | 1/A/188:194, 1/A/201:208  | 8x7 Sarcin-Ricin; G-bulge | geometric IL_5J7L_250 NA  | |
| IL_5LZE_007 | 1/A/239:245, 1/A/253:258  | 7x6 Sarcin-Ricin; G-bulge | homologous IL_5J7L_251 NA  | |
| IL_5LZE_008 | 1/A/269:271, 1/A/366:370  | No text annotation | homologous IL_5J7L_252 NA  | |
| IL_5LZE_010 | 1/A/293:295, 1/A/343:347  | No text annotation | homologous IL_5J7L_254 NA  | |
| IL_5LZE_011 | 1/A/481:484, 1/A/496:509  | No text annotation | homologous IL_5J7L_255 NA  | |
| IL_5LZE_012 | 1/A/536:539, 1/A/554:557  | Double sheared | homologous IL_5J7L_256 NA  | |
| IL_5LZE_013 | 1/A/564:566, 1/A/575:577  | Isolated non-canonical cWW pair | homologous IL_5J7L_257 NA  | |
| IL_5LZE_014 | 1/A/606:610, 1/A/618:622  | AAA cross-strand stack | homologous IL_5J7L_258 NA  | |
| IL_5LZE_015 | 1/A/672:674, 1/A/806:808  | No text annotation | homologous IL_7RQB_017 NA  | |
| IL_5LZE_016 | 1/A/674:678, 1/A/799:806  | tHW-tHW cross-strand stack | geometric IL_7RQB_018 NA  | |
| IL_5LZE_017 | 1/A/697:698, 1/A/763:765  | Single bulged A | homologous IL_5J7L_261 NA  | |
| IL_5LZE_018 | 1/A/702:703, 1/A/728:730  | Single bulged G | homologous IL_5J7L_262 NA  | |
| IL_5LZE_019 | 1/A/703:707, 1/A/724:728  | Triple sheared | geometric IL_7RQB_021 NA  | |
| IL_5LZE_020 | 1/A/738:740, 1/A/757:758  | Major groove platform | homologous IL_4WF9_026 IL_48076.8  | |
| IL_5LZE_021 | 1/A/775:777, 1/A/787:791  | Multiple bulged bases | geometric IL_5J7L_265 NA  | |
| IL_5LZE_022 | 1/A/837:838, 1/A/940:942  | Single stack bend | homologous IL_5J7L_266 NA  | |
| IL_5LZE_180 | 1/A/844:847, 1/A/933:934  | 90 degree turn | geometric IL_5J7L_267 NA  | |
| IL_5LZE_181 | 1/A/844:848, 1/A/930:934  | No text annotation | homologous IL_5J7L_399 NA  | |
| IL_5LZE_024 | 1/A/847:848, 1/A/930:933  | Stack outside cWW | homologous IL_5J7L_268 NA  | |
| IL_5LZE_025 | 1/A/850:851, 1/A/926:928  | Single stack bend | homologous IL_5J7L_269 NA  | |
| IL_5LZE_026 | 1/A/856:862, 1/A/915:921  | 7x7 Sarcin-Ricin with intercalated A; G-bulge | geometric IL_5J7L_270 NA  | |
| IL_5LZE_027 | 1/A/862:863, 1/A/913:915  | Single bulged G | homologous IL_5J7L_271 NA  | |
| IL_5LZE_028 | 1/A/864:868, 1/A/909:912  | C-loop with bulged stacked A's | homologous IL_5J7L_272 NA  | |
| IL_5LZE_029 | 1/A/870:872, 1/A/905:907  | Isolated non-canonical cWW pair | homologous IL_5J7L_273 NA  | |
| IL_5LZE_030 | 1/A/875:879, 1/A/898:902  | Double sheared with non-canonical cWW | homologous IL_5J7L_274 NA  | |
| IL_5LZE_032 | 1/A/994:996, 1/A/1159:1160  | Single bulged C | homologous IL_7RQB_035 NA  | |
| IL_5LZE_033 | 1/A/998:1002, 1/A/1153:1157  | UAA/GAN | homologous IL_5J7L_277 NA  | |
| IL_5LZE_034 | 1/A/1004:1011, 1/A/1150:1151  | SSU/LSU pseudoknot | homologous IL_5J7L_278 NA  | |
| IL_5LZE_035 | 1/A/1011:1013, 1/A/1149:1150  | Single bulged U | geometric IL_5J7L_279 NA  | |
| IL_5LZE_036 | 1/A/1018:1024, 1/A/1140:1144  | Kink-turn related | homologous IL_5J7L_280 NA  | |
| IL_5LZE_037 | 1/A/1024:1030, 1/A/1124:1140  | No text annotation | geometric IL_5J7L_281 NA  | |
| IL_5LZE_038 | 1/A/1031:1034, 1/A/1121:1123  | Isolated non-canonical cWW pair | homologous IL_7RQB_041 NA  | |
| IL_5LZE_039 | 1/A/1038:1041, 1/A/1114:1117  | Tandem non-canonical cWW pairs | homologous IL_5J7L_283 NA  | |
| IL_5LZE_040 | 1/A/1043:1051, 1/A/1108:1112  | Kink-turn | homologous IL_5J7L_284 NA  | |
| IL_5LZE_043 | 1/A/1196:1198, 1/A/1247:1250  | Isolated cWS basepair | homologous IL_5J7L_286 NA  | |
| IL_5LZE_044 | 1/A/1202:1206, 1/A/1240:1243  | No text annotation | homologous IL_5J7L_287 NA  | |
| IL_5LZE_045 | 1/A/1208:1215, 1/A/1234:1238  | Kink-turn | homologous IL_5J7L_288 NA  | |
| IL_5LZE_046 | 1/A/1262:1269, 1/A/2011:2017  | 8x7 Sarcin-Ricin; G-bulge | homologous IL_5J7L_289 NA  | |
| IL_5LZE_047 | 1/A/1310:1313, 1/A/1603:1604  | Major groove platform; stack outside cWW | homologous IL_4WF9_049 IL_74641.2  | |
| IL_5LZE_048 | 1/A/1319:1323, 1/A/1331:1333  | C-loop | homologous IL_5J7L_291 NA  | |
| IL_5LZE_049 | 1/A/1351:1355, 1/A/1376:1380  | UAA/GAN | homologous IL_5J7L_292 NA  | |
| IL_5LZE_050 | 1/A/1357:1361, 1/A/1370:1374  | tSH-tHW-tHS | homologous IL_5J7L_293 NA  | |
| IL_5LZE_051 | 1/A/1415:1416, 1/A/1582:1587  | No text annotation | homologous IL_5J7L_294 NA  | |
| IL_5LZE_052 | 1/A/1417:1421, 1/A/1577:1581  | UAA/GAN | homologous IL_5J7L_295 NA  | |
| IL_5LZE_053 | 1/A/1432:1435, 1/A/1557:1561  | Tandem non-canonical cWW pairs | homologous IL_5J7L_296 NA  | |
| IL_5LZE_054 | 1/A/1437:1440, 1/A/1551:1555  | tSH-tHW | homologous IL_5J7L_297 NA  | |
| IL_5LZE_055 | 1/A/1450:1451, 1/A/1459:1461  | Single bulged U | geometric IL_4C7O_001 IL_97561.3  | |
| IL_5LZE_056 | 1/A/1468:1471, 1/A/1520:1524  | No text annotation | homologous IL_5J7L_299 NA  | |
| IL_5LZE_182 | 1/A/1474:1478, 1/A/1513:1517  | tSH-tHW-tHS | homologous IL_5J7L_300 NA  | |
| IL_5LZE_058 | 1/A/1481:1482, 1/A/1507:1510  | 180 degree turn | homologous IL_5J7L_301 NA  | |
| IL_5LZE_059 | 1/A/1489:1491, 1/A/1499:1500  | Single bulged A | homologous IL_5J7L_302 NA  | |
| IL_5LZE_060 | 1/A/1526:1529, 1/A/1542:1546  | UAA/GAN variation | homologous IL_5J7L_303 NA  | |
| IL_5LZE_061 | 1/A/1651:1656, 1/A/2004:2006  | No text annotation | homologous IL_5J7L_304 NA  | |
| IL_5LZE_062 | 1/A/1663:1665, 1/A/1995:1997  | Isolated tWW turn | homologous IL_4WF9_063 IL_10432.1  | |
| IL_5LZE_063 | 1/A/1666:1669, 1/A/1993:1994  | Major groove platform; stack outside cWW | homologous IL_4WF9_064 IL_74641.2  | |
| IL_5LZE_183 | 1/A/1666:1674, 1/A/1990:1994  | No text annotation | homologous IL_5J7L_386 NA  | |
| IL_5LZE_064 | 1/A/1669:1674, 1/A/1990:1993  | Intercalated tWH | geometric IL_5J7L_307 NA  | |
| IL_5LZE_065 | 1/A/1686:1691, 1/A/1696:1702  | tSH-tSH-tHH-tHS | homologous IL_7RQB_068 NA  | |
| IL_5LZE_066 | 1/A/1712:1718, 1/A/1742:1746  | 6x5 Sarcin-Ricin; G-bulge | homologous IL_5J7L_309 NA  | |
| IL_5LZE_067 | 1/A/1720:1724, 1/A/1736:1740  | Triple sheared | homologous IL_5J7L_310 NA  | |
| IL_5LZE_068 | 1/A/1727:1728, 1/A/1731:1733  | Single bulged C | homologous IL_5J7L_311 NA  | |
| IL_5LZE_069 | 1/A/1770:1771, 1/A/1980:1982  | Single bulged A | homologous IL_7A0S_064 IL_14190.2  | |
| IL_5LZE_070 | 1/A/1798:1804, 1/A/1813:1821  | Kink-turn related | homologous IL_5J7L_313 NA  | |
| IL_5LZE_071 | 1/A/1837:1840, 1/A/1902:1903  | Minor groove platform, major groove intercalation | homologous IL_5J7L_314 NA  | |
| IL_5LZE_072 | 1/A/1841:1842, 1/A/1898:1901  | Major groove intercalation | homologous IL_5J7L_315 NA  | |
| IL_5LZE_073 | 1/A/1846:1849, 1/A/1893:1894  | Major groove minor groove platform; mini C-loop | homologous IL_5J7L_316 NA  | |
| IL_5LZE_184 | 1/A/1851:1860, 1/A/1882:1891  | No text annotation | homologous IL_5J7L_387 NA  | |
| IL_5LZE_074 | 1/A/1864:1867, 1/A/1874:1878  | UAA/GAN related | homologous IL_5J7L_317 NA  | |
| IL_5LZE_075 | 1/A/1933:1934, 1/A/1964:1967  | Bulged stacked bases | geometric IL_7RQB_076 NA  | |
| IL_5LZE_076 | 1/A/1934:1945, 1/A/1961:1964  | No text annotation | homologous IL_4WF9_077 IL_84014.1  | |
| IL_5LZE_077 | 1/A/2050:2052, 1/A/2617:2618  | Major groove platform | homologous IL_5J7L_320 NA  | |
| IL_5LZE_078 | 1/A/2054:2056, 1/A/2612:2615  | No text annotation | homologous IL_5J7L_321 NA  | |
| IL_5LZE_185 | 1/A/2067:2069, 1/A/2442:2443  | Single bulged U | homologous IL_4WF9_080 IL_97561.3  | |
| IL_5LZE_081 | 1/A/2070:2071, 1/A/2438:2441  | Minor groove platform | homologous IL_5J7L_324 NA  | |
| IL_5LZE_082 | 1/A/2081:2083, 1/A/2236:2239  | Isolated tHS basepair with bulges | homologous IL_5J7L_325 NA  | |
| IL_5LZE_083 | 1/A/2085:2087, 1/A/2232:2234  | No text annotation | homologous IL_7RQB_083 NA  | |
| IL_5LZE_088 | 1/A/2202:2204, 1/A/2220:2221  | Single bulged U | homologous IL_5J7L_331 NA  | |
| IL_5LZE_089 | 1/A/2350:2353, 1/A/2364:2367  | Double sheared | homologous IL_5J7L_333 NA  | |
| IL_5LZE_090 | 1/A/2401:2403, 1/A/2414:2415  | No text annotation | geometric IL_8GLP_013 IL_97561.3  | |
| IL_5LZE_188 | 1/A/2453:2454, 1/A/2498:2500  | Single stack bend | homologous IL_5J7L_391 NA  | |
| IL_5LZE_189 | 1/A/2454:2455, 1/A/2496:2498  | Major groove platform | homologous IL_5J7L_392 NA  | |
| IL_5LZE_190 | 1/A/2457:2459, 1/A/2493:2494  | Major groove platform | homologous IL_5J7L_393 NA  | |
| IL_5LZE_093 | 1/A/2459:2461, 1/A/2489:2493  | Major groove minor groove platform with extra cWW | geometric IL_5J7L_337 NA  | |
| IL_5LZE_094 | 1/A/2466:2470, 1/A/2480:2484  | Double sheared with non-canonical cWW | homologous IL_5J7L_338 NA  | |
| IL_5LZE_191 | 1/A/2507:2508, 1/A/2580:2582  | Major groove platform | homologous IL_5J7L_394 NA  | |
| IL_5LZE_096 | 1/A/2510:2512, 1/A/2574:2578  | Isolated non-canonical cWW with bulges | homologous IL_7RQB_097 NA  | |
| IL_5LZE_097 | 1/A/2512:2513, 1/A/2571:2574  | No text annotation | geometric IL_5J7L_341 NA  | |
| IL_5LZE_098 | 1/A/2522:2523, 1/A/2540:2543  | Major groove platform with intercalation | homologous IL_5J7L_342 NA  | |
| IL_5LZE_100 | 1/A/2591:2592, 1/A/2601:2603  | Single bulged A | geometric IL_7RQB_101 NA  | |
| IL_5LZE_101 | 1/A/2636:2640, 1/A/2774:2782  | tSH-tHS-tHW | homologous IL_5J7L_345 NA  | |
| IL_5LZE_102 | 1/A/2652:2658, 1/A/2663:2668  | Sarcin-Ricin target in LSU H95; G-bulge | geometric IL_5J7L_346 NA  | |
| IL_5LZE_103 | 1/A/2680:2684, 1/A/2725:2727  | C-loop | homologous IL_5J7L_347 NA  | |
| IL_5LZE_104 | 1/A/2687:2691, 1/A/2718:2722  | UAA/GAN related, with intercalation | homologous IL_5J7L_348 NA  | |
| IL_5LZE_105 | 1/A/2695:2696, 1/A/2711:2714  | Multiple bulged bases | homologous IL_5J7L_349 NA  | |
| IL_5LZE_192 | 1/A/2737:2742, 1/A/2762:2767  | UAA/GAN with extra cWW | homologous IL_5J7L_350 NA  | |
| IL_5LZE_107 | 1/A/2806:2811, 1/A/2889:2892  | No text annotation | homologous IL_5J7L_351 NA  | |
| IL_5LZE_108 | 1/A/2838:2839, 1/A/2878:2880  | Major groove intercalation | homologous IL_5J7L_352 NA  | |
| IL_5LZE_109 | 1/A/2843:2846, 1/A/2870:2874  | Multiple bulged bases with non-canonical cWW | homologous IL_5J7L_353 NA  | |
| IL_5LZE_110 | 1/A/2847:2852, 1/A/2865:2869  | tHS double platform | homologous IL_7RQB_110 NA  | |
| IL_5LZE_111 | 1/B/17:18, 1/B/65:67  | Major groove intercalation | homologous IL_5J7L_355 NA  | |
| IL_5LZE_112 | 1/B/23:28, 1/B/56:60  | No text annotation | homologous IL_5J7L_356 NA  | |
| IL_5LZE_113 | 1/B/30:31, 1/B/51:54  | Major groove minor groove platform; mini C-loop | homologous IL_5J7L_357 NA  | |
| IL_5LZE_114 | 1/B/34:38, 1/B/44:48  | Symmetric double minor groove platform | geometric IL_5J7L_358 NA  | |
| IL_5LZE_115 | 1/B/71:79, 1/B/97:105  | Bacterial 5S Loop E | homologous IL_5J7L_359 NA  | |
| IL_5LZE_116 | 1/a/30:32, 1/a/552:553  | Single bulged G | homologous IL_5J7L_001 NA  | |
| IL_5LZE_117 | 1/a/44:45, 1/a/396:398  | Single bulged A | homologous IL_5J7L_002 NA  | |
| IL_5LZE_118 | 1/a/47:52, 1/a/359:361  | No text annotation | homologous IL_5J7L_003 NA  | |
| IL_5LZE_119 | 1/a/54:56, 1/a/356:357  | Minor groove platform | homologous IL_4LFB_004 IL_34520.3  | |
| IL_5LZE_120 | 1/a/63:66, 1/a/103:104  | Multiple bulged bases | homologous IL_6CZR_117 NA  | |
| IL_5LZE_121 | 1/a/67:69, 1/a/99:102  | Minor groove platform with extra cWW | homologous IL_5J7L_006 NA  | |
| IL_5LZE_124 | 1/a/128:131, 1/a/231:233  | Isolated non-canonical cWW pair | homologous IL_5J7L_009 NA  | |
| IL_5LZE_125 | 1/a/132:136, 1/a/227:230  | No text annotation | homologous IL_4LFB_008 IL_60988.2  | |
| IL_5LZE_127 | 1/a/147:153, 1/a/168:175  | tWH-tWH-tHW-tHW | homologous IL_5J7L_012 NA  | |
| IL_5LZE_129 | 1/a/242:247, 1/a/277:284  | Kink-turn with non-sequential stacking | homologous IL_5J7L_014 NA  | |
| IL_5LZE_130 | 1/a/249:252, 1/a/274:275  | No text annotation | homologous IL_4LFB_012 IL_22002.1  | |
| IL_5LZE_131 | 1/a/292:293, 1/a/304:308  | C-loop | homologous IL_6CZR_125 NA  | |
| IL_5LZE_132 | 1/a/367:369, 1/a/392:393  | Single bulged U | geometric IL_5J7L_017 NA  | |
| IL_5LZE_133 | 1/a/371:375, 1/a/389:390  | C-loop | homologous IL_5J7L_018 NA  | |
| IL_5LZE_134 | 1/a/375:376, 1/a/387:389  | Single bulged G | geometric IL_5J7L_019 NA  | |
| IL_5LZE_135 | 1/a/409:416, 1/a/427:433  | No text annotation | homologous IL_5J7L_020 NA  | |
| IL_5LZE_136 | 1/a/440:442, 1/a/492:497  | No text annotation | homologous IL_5J7L_021 NA  | |
| IL_5LZE_137 | 1/a/446:450, 1/a/483:488  | tSH-tHW-tWW | homologous IL_5J7L_022 NA  | |
| IL_5LZE_138 | 1/a/450:455, 1/a/477:483  | No text annotation | geometric IL_5J7L_023 NA  | |
| IL_5LZE_139 | 1/a/504:511, 1/a/540:541  | SSU/LSU pseudoknot | homologous IL_5J7L_024 NA  | |
| IL_5LZE_140 | 1/a/515:521, 1/a/528:536  | Kink-turn related | homologous IL_4LFB_021 IL_52042.1  | |
| IL_5LZE_141 | 1/a/569:575, 1/a/880:881  | No text annotation | homologous IL_4LFB_022 IL_20847.1  | |
| IL_5LZE_142 | 1/a/580:584, 1/a/757:761  | tSH-tHW-tHS | homologous IL_5J7L_027 NA  | |
| IL_5LZE_143 | 1/a/594:596, 1/a/644:645  | Major groove platform | homologous IL_5J7L_028 NA  | |
| IL_5LZE_144 | 1/a/597:598, 1/a/640:643  | Major groove minor groove platform; mini C-loop | homologous IL_4LFB_025 IL_73108.2  | |
| IL_5LZE_145 | 1/a/605:612, 1/a/628:633  | No text annotation | homologous IL_5J7L_030 NA  | |
| IL_5LZE_146 | 1/a/654:655, 1/a/751:754  | Major groove platform; stack outside cWW | homologous IL_4LFB_027 IL_74641.2  | |
| IL_5LZE_147 | 1/a/659:660, 1/a/745:747  | Single stack bend | homologous IL_5J7L_032 NA  | |
| IL_5LZE_148 | 1/a/662:666, 1/a/740:743  | Tandem non-canonical cWW pairs | homologous IL_5J7L_033 NA  | |
| IL_5LZE_149 | 1/a/684:688, 1/a/699:706  | Kink-turn | homologous IL_5J7L_035 NA  | |
| IL_5LZE_150 | 1/a/774:778, 1/a/804:805  | Left turn | homologous IL_4LFB_032 IL_29346.3  | |
| IL_5LZE_151 | 1/a/779:783, 1/a/799:803  | tSH-tHW-tHS | homologous IL_5J7L_037 NA  | |
| IL_5LZE_152 | 1/a/887:894, 1/a/905:910  | 8x6 Sarcin-Ricin with inserted Y; G-bulge | homologous IL_5J7L_038 NA  | |
| IL_5LZE_153 | 1/a/922:923, 1/a/1393:1395  | Single bulged A | homologous IL_4LFB_035 IL_14190.2  | |
| IL_5LZE_154 | 1/a/925:927, 1/a/1390:1391  | Single bulged G | homologous IL_5J7L_040 NA  | |
| IL_5LZE_155 | 1/a/933:935, 1/a/1380:1384  | Minor groove platform | homologous IL_5J7L_041 NA  | |
| IL_5LZE_156 | 1/a/953:954, 1/a/1226:1228  | No text annotation | homologous IL_6CZR_150 NA  | |
| IL_5LZE_157 | 1/a/993:997, 1/a/1044:1045  | Minor groove platform | geometric IL_5J7L_043 NA  | |
| IL_5LZE_159 | 1/a/1048:1050, 1/a/1208:1209  | Single bulged U | geometric IL_5J7L_046 NA  | |
| IL_5LZE_161 | 1/a/1052:1056, 1/a/1204:1206  | Isolated cWS basepair | geometric IL_4LFB_044 IL_82453.1  | |
| IL_5LZE_162 | 1/a/1057:1058, 1/a/1199:1203  | Minor groove platform | homologous IL_5J7L_048 NA  | |
| IL_5LZE_163 | 1/a/1060:1061, 1/a/1195:1197  | Single bulged A | geometric IL_5J7L_049 NA  | |
| IL_5LZE_164 | 1/a/1061:1063, 1/a/1193:1195  | Isolated non-canonical cWW pair | homologous IL_4LFB_047 IL_68118.3  | |
| IL_5LZE_165 | 1/a/1124:1128, 1/a/1144:1149  | No text annotation | homologous IL_5J7L_051 NA  | |
| IL_5LZE_166 | 1/a/1129:1132, 1/a/1142:1143  | Minor groove platform | homologous IL_5J7L_052 NA  | |
| IL_5LZE_167 | 1/a/1158:1161, 1/a/1175:1181  | No text annotation | homologous IL_5J7L_053 NA  | |
| IL_5LZE_193 | 1/a/1247:1253, 1/a/1284:1290  | No text annotation | homologous IL_5J7L_054 NA  | |
| IL_5LZE_169 | 1/a/1255:1258, 1/a/1277:1282  | 180 degree turn | homologous IL_5J7L_055 NA  | |
| IL_5LZE_170 | 1/a/1259:1263, 1/a/1272:1276  | Double sheared with non-canonical cWW | homologous IL_5J7L_056 NA  | |
| IL_5LZE_171 | 1/a/1303:1308, 1/a/1329:1334  | No text annotation | homologous IL_4LFB_055 IL_57885.2  | |
| IL_5LZE_172 | 1/a/1399:1401, 1/a/1501:1504  | No text annotation | geometric IL_5J7L_058 NA  | |
| IL_5LZE_173 | 1/a/1401:1404, 1/a/1497:1501  | No text annotation | homologous IL_5J7L_059 NA  | |
| IL_5LZE_194 | 1/a/1405:1407, 1/a/1494:1496  | Isolated non-canonical cWW pair | homologous IL_5J7L_363 NA  | |
| IL_5LZE_195 | 1/a/1407:1409, 1/a/1491:1494  | No text annotation | homologous IL_4LFB_070 IL_29925.2  | |
| IL_5LZE_175 | 1/a/1412:1414, 1/a/1486:1488  | Isolated non-canonical cWW pair | homologous IL_5J7L_061 NA  | |
| IL_5LZE_176 | 1/a/1416:1419, 1/a/1481:1484  | Double sheared | homologous IL_5J7L_062 NA  | |
| IL_5LZE_177 | 1/a/1430:1435, 1/a/1466:1470  | Triple sheared related | homologous IL_5J7L_063 NA  | |
| IL_5LZE_178 | 1/a/1440:1442, 1/a/1460:1461  | Single bulged A | homologous IL_5J7L_064 NA  | |
| IL_5LZE_179 | 1/a/1445:1448, 1/a/1455:1457  | No text annotation | homologous IL_5J7L_065 NA  | 
Problematic loops
| # | loop id | Problem | Sequence | 
|---|---|---|---|
| IL_5LZE_009 | No text annotation | ||
| IL_5LZE_023 | No text annotation | ||
| IL_5LZE_031 | Minor groove platform | ||
| IL_5LZE_041 | No text annotation | ||
| IL_5LZE_042 | No text annotation | ||
| IL_5LZE_057 | No text annotation | ||
| IL_5LZE_079 | No text annotation | ||
| IL_5LZE_080 | Isolated non-canonical cWW pair | ||
| IL_5LZE_084 | No text annotation | ||
| IL_5LZE_186 | No text annotation | ||
| IL_5LZE_085 | No text annotation | ||
| IL_5LZE_086 | No text annotation | ||
| IL_5LZE_087 | No text annotation | ||
| IL_5LZE_187 | Tandem non-canonical cWW pairs | ||
| IL_5LZE_091 | No text annotation | ||
| IL_5LZE_092 | No text annotation | ||
| IL_5LZE_095 | No text annotation | ||
| IL_5LZE_099 | No text annotation | ||
| IL_5LZE_106 | No text annotation | ||
| IL_5LZE_122 | Minor groove platform | ||
| IL_5LZE_123 | Single bulged G, near cWW | ||
| IL_5LZE_126 | Isolated cWH basepair | ||
| IL_5LZE_128 | Minor groove platform | ||
| IL_5LZE_158 | Single stack bend | ||
| IL_5LZE_160 | No text annotation | ||
| IL_5LZE_168 | No text annotation | ||
| IL_5LZE_174 | No text annotation | 
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info | 
|---|---|---|---|---|
| J3_5LZE_001 | 1/A/30:31, 1/A/474:481, 1/A/509:510  | No text annotation | homologous J3_7RQB_001 NA  | |
| J3_5LZE_026 | 1/A/30:31, 1/A/474:484, 1/A/496:510  | No text annotation | homologous J3_5J7L_066 NA  | |
| J3_5LZE_027 | 1/A/32:35, 1/A/445:461, 1/A/468:473  | No text annotation | homologous J3_5J7L_067 NA  | |
| J3_5LZE_002 | 1/A/56:57, 1/A/70:76, 1/A/110:114  | No text annotation | homologous J3_5J7L_037 NA  | |
| J3_5LZE_028 | 1/A/297:301, 1/A/316:325, 1/A/337:341  | No text annotation | homologous J3_5J7L_068 NA  | |
| J3_5LZE_003 | 1/A/683:689, 1/A/773:775, 1/A/791:794  | No text annotation | homologous J3_7RQB_004 NA  | |
| J3_5LZE_004 | 1/A/698:700, 1/A/732:736, 1/A/760:763  | No text annotation | homologous J3_7RQB_005 NA  | |
| J3_5LZE_005 | 1/A/1298:1303, 1/A/1625:1627, 1/A/1639:1642  | No text annotation | homologous J3_5J7L_041 NA  | |
| J3_5LZE_006 | 1/A/1306:1309, 1/A/1605:1611, 1/A/1620:1622  | No text annotation | homologous J3_7A0S_007 J3_47341.1  | |
| J3_5LZE_007 | 1/A/1344:1349, 1/A/1382:1385, 1/A/1402:1403  | No text annotation | homologous J3_5J7L_043 NA  | |
| J3_5LZE_029 | 1/A/1424:1429, 1/A/1564:1565, 1/A/1568:1574  | No text annotation | homologous J3_5J7L_069 NA  | |
| J3_5LZE_008 | 1/A/2091:2093, 1/A/2196:2200, 1/A/2223:2228  | Kink-turn 3-way junction | homologous J3_5J7L_044 NA  | |
| J3_5LZE_030 | 1/A/2282:2284, 1/A/2384:2395, 1/A/2421:2427  | No text annotation | homologous J3_5J7L_070 NA  | |
| J3_5LZE_009 | 1/A/2295:2299, 1/A/2317:2323, 1/A/2332:2337  | No text annotation | homologous J3_5J7L_071 NA  | |
| J3_5LZE_010 | 1/A/2517:2520, 1/A/2545:2547, 1/A/2561:2567  | No text annotation | homologous J3_5J7L_046 NA  | |
| J3_5LZE_011 | 1/A/2789:2791, 1/A/2805:2806, 1/A/2892:2894  | No text annotation | homologous J3_5J7L_047 NA  | |
| J3_5LZE_012 | 1/A/2812:2815, 1/A/2831:2836, 1/A/2882:2888  | No text annotation | homologous J3_5J7L_048 NA  | |
| J3_5LZE_013 | 1/B/10:16, 1/B/68:70, 1/B/106:110  | No text annotation | homologous J3_7A0S_014 NA  | |
| J3_5LZE_014 | 1/a/46:47, 1/a/361:367, 1/a/393:395  | No text annotation | homologous J3_5J7L_001 NA  | |
| J3_5LZE_031 | 1/a/46:47, 1/a/361:369, 1/a/392:395  | No text annotation | ||
| J3_5LZE_032 | 1/a/46:52, 1/a/359:369, 1/a/392:395  | No text annotation | ||
| J3_5LZE_015 | 1/a/586:588, 1/a/651:654, 1/a/754:755  | No text annotation | homologous J3_5J7L_002 NA  | |
| J3_5LZE_033 | 1/a/586:588, 1/a/651:655, 1/a/751:755  | No text annotation | homologous J3_5J7L_051 NA  | |
| J3_5LZE_034 | 1/a/672:677, 1/a/713:725, 1/a/732:734  | No text annotation | ||
| J3_5LZE_016 | 1/a/826:829, 1/a/857:861, 1/a/868:874  | No text annotation | homologous J3_5J7L_004 NA  | |
| J3_5LZE_017 | 1/a/936:939, 1/a/1344:1350, 1/a/1372:1379  | No text annotation | homologous J3_4LFB_002 J3_85722.1  | |
| J3_5LZE_018 | 1/a/943:946, 1/a/1235:1237, 1/a/1337:1340  | No text annotation | homologous J3_5J7L_005 NA  | |
| J3_5LZE_019 | 1/a/955:962, 1/a/973:984, 1/a/1221:1225  | No text annotation | homologous J3_5J7L_006 NA  | |
| J3_5LZE_020 | 1/a/990:993, 1/a/1045:1047, 1/a/1210:1215  | No text annotation | homologous J3_4LFB_005 J3_84394.1  | |
| J3_5LZE_035 | 1/a/990:997, 1/a/1044:1047, 1/a/1210:1215  | No text annotation | homologous J3_5J7L_053 NA  | |
| J3_5LZE_022 | 1/a/1063:1068, 1/a/1107:1113, 1/a/1187:1193  | No text annotation | homologous J3_5J7L_008 NA  | |
| J3_5LZE_023 | 1/a/1073:1074, 1/a/1083:1087, 1/a/1098:1102  | No text annotation | homologous J3_6CZR_024 NA  | |
| J3_5LZE_024 | 1/a/1116:1118, 1/a/1155:1158, 1/a/1181:1184  | No text annotation | homologous J3_5J7L_010 NA  | |
| J3_5LZE_036 | 1/a/1116:1118, 1/a/1155:1161, 1/a/1175:1184  | No text annotation | homologous J3_5J7L_054 NA  | |
| J3_5LZE_025 | 1/a/1237:1241, 1/a/1296:1303, 1/a/1334:1337  | No text annotation | homologous J3_5J7L_011 NA  | |
| J4_5LZE_001 | 1/A/268:269, 1/A/370:375, 1/A/399:406, 1/A/421:424  | No text annotation | homologous J4_5J7L_018 NA  | |
| J4_5LZE_002 | 1/A/601:604, 1/A/624:628, 1/A/635:638, 1/A/650:656  | No text annotation | homologous J4_5J7L_020 NA  | |
| J4_5LZE_003 | 1/A/1270:1276, 1/A/1294:1295, 1/A/1645:1648, 1/A/2009:2010  | No text annotation | homologous J4_5J7L_021 NA  | |
| J4_5LZE_004 | 1/A/1310:1314, 1/A/1338:1343, 1/A/1404:1405, 1/A/1597:1604  | No text annotation | homologous J4_5J7L_022 NA  | |
| J4_5LZE_005 | 1/A/1313:1314, 1/A/1338:1343, 1/A/1404:1405, 1/A/1597:1603  | No text annotation | homologous J4_5J7L_023 NA  | |
| J4_5LZE_006 | 1/A/1444:1445, 1/A/1466:1467, 1/A/1525:1526, 1/A/1546:1547  | No text annotation | homologous J4_5J7L_024 NA  | |
| J4_5LZE_007 | 1/A/1772:1776, 1/A/1788:1792, 1/A/1827:1830, 1/A/1975:1979  | No text annotation | homologous J4_5J7L_025 NA  | |
| J4_5LZE_008 | 1/A/1833:1835, 1/A/1905:1906, 1/A/1924:1933, 1/A/1967:1972  | No text annotation | homologous J4_9DFE_008 J4_42306.1  | |
| J4_5LZE_009 | 1/A/2285:2289, 1/A/2343:2347, 1/A/2370:2372, 1/A/2381:2383  | No text annotation | homologous J4_5J7L_027 NA  | |
| J4_5LZE_010 | 1/A/2643:2646, 1/A/2674:2676, 1/A/2731:2735, 1/A/2769:2771  | No text annotation | homologous J4_5J7L_028 NA  | |
| J4_5LZE_011 | 1/a/115:122, 1/a/239:240, 1/a/286:289, 1/a/311:312  | No text annotation | homologous J4_5J7L_001 NA  | |
| J4_5LZE_012 | 1/a/142:144, 1/a/178:184, 1/a/193:198, 1/a/219:221  | No text annotation | homologous J4_5J7L_002 NA  | |
| J4_5LZE_013 | 1/a/575:577, 1/a/764:769, 1/a/810:821, 1/a/879:880  | No text annotation | homologous J4_5J7L_003 NA  | |
| J4_5LZE_014 | 1/v/7:10, 1/v/25:27, 1/v/43:49, 1/v/65:66  | tRNA junction | homologous J4_9DFC_015 NA  | |
| J5_5LZE_001 | 1/A/47:54, 1/A/116:121, 1/A/130:131, 1/A/148:150, 1/A/176:178  | No text annotation | homologous J5_5J7L_013 NA  | |
| J5_5LZE_002 | 1/A/531:533, 1/A/560:564, 1/A/577:579, 1/A/1261:1262, 1/A/2017:2018  | No text annotation | homologous J5_5J7L_014 NA  | |
| J5_5LZE_003 | 1/A/584:589, 1/A/668:671, 1/A/809:812, 1/A/1195:1196, 1/A/1250:1256  | No text annotation | homologous J5_5J7L_015 NA  | |
| J5_5LZE_004 | 1/A/1674:1682, 1/A/1706:1707, 1/A/1751:1752, 1/A/1756:1764, 1/A/1988:1990  | No text annotation | homologous J5_5J7L_016 NA  | |
| J5_5LZE_005 | 1/A/2057:2064, 1/A/2446:2453, 1/A/2500:2507, 1/A/2582:2588, 1/A/2606:2611  | No text annotation | ||
| J5_5LZE_006 | 1/A/2074:2077, 1/A/2243:2246, 1/A/2258:2259, 1/A/2281:2282, 1/A/2427:2435  | No text annotation | homologous J5_4WF9_007 J5_39529.2  | |
| J5_5LZE_007 | 1/a/36:39, 1/a/403:406, 1/a/436:440, 1/a/497:500, 1/a/545:548  | No text annotation | homologous J5_5J7L_001 NA  | |
| J5_5LZE_008 | 1/a/36:39, 1/a/403:406, 1/a/436:442, 1/a/492:500, 1/a/545:548  | No text annotation | homologous J5_5J7L_002 NA  | |
| J5_5LZE_009 | 1/a/58:61, 1/a/106:113, 1/a/314:316, 1/a/337:339, 1/a/350:354  | No text annotation | homologous J5_5J7L_003 NA  | |
| J5_5LZE_011 | 1/y/7:10, 1/y/25:26, 1/y/44:45, 1/y/47Q:49, 1/y/65:66  | No text annotation | ||
| J6_5LZE_001 | 1/A/45:46, 1/A/179:183, 1/A/214:224, 1/A/231:235, 1/A/262:266, 1/A/426:433  | No text annotation | ||
| J6_5LZE_002 | 1/A/2074:2077, 1/A/2243:2246, 1/A/2258:2259, 1/A/2281:2284, 1/A/2384:2395, 1/A/2421:2435  | No text annotation | ||
| J7_5LZE_001 | 1/A/8:15, 1/A/525:531, 1/A/2018:2023, 1/A/2040:2043, 1/A/2625:2630, 1/A/2788:2789, 1/A/2894:2895  | No text annotation | ||
| J7_5LZE_002 | 1/A/817:822, 1/A/835:838, 1/A/940:946, 1/A/971:976, 1/A/987:991, 1/A/1163:1164, 1/A/1185:1190  | No text annotation | 
Problematic loops
| # | loop id | Problem | Sequence | 
|---|---|---|---|
| J3_5LZE_021 | No text annotation | ||
| J5_5LZE_010 | No text annotation | 
Coloring options: