HL_5LZF_028

3D structure

PDB id

5LZF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

ACGCUUAUGCGU

Length

12 nucleotides

Bulged bases

5LZF|1|A|A|1175

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZF|1|A|A|1169
5LZF|1|A|C|1170
5LZF|1|A|G|1171
5LZF|1|A|C|1172
5LZF|1|A|U|1173
5LZF|1|A|U|1174
5LZF|1|A|A|1175
5LZF|1|A|U|1176
5LZF|1|A|G|1177
5LZF|1|A|C|1178
5LZF|1|A|G|1179
5LZF|1|A|U|1180

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15