HL_5LZF_051
3D structure
- PDB id
- 5LZF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- CUG(OMG)GGCGG
- Length
- 9 nucleotides
- Bulged bases
- 5LZF|1|A|G|2250
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5LZF_051 not in the Motif Atlas
- Homologous match to HL_4WF9_049
- Geometric discrepancy: 0.1309
- The information below is about HL_4WF9_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11974.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 17
Unit IDs
5LZF|1|A|C|2248
5LZF|1|A|U|2249
5LZF|1|A|G|2250
5LZF|1|A|OMG|2251
5LZF|1|A|G|2252
5LZF|1|A|G|2253
5LZF|1|A|C|2254
5LZF|1|A|G|2255
5LZF|1|A|G|2256
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain M
- 50S ribosomal protein L16
- Chain W
- 50S ribosomal protein L27
- Chain y
- Selenocysteine transfer RNA
Coloring options: