HL_5LZS_060
3D structure
- PDB id
- 5LZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- GAGACGUUUU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5LZS_060 not in the Motif Atlas
- Geometric match to HL_5TBW_226
- Geometric discrepancy: 0.3608
- The information below is about HL_5TBW_226
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59342.2
- Basepair signature
- cWW-F-F-F-F-cWW-F-F
- Number of instances in this motif group
- 5
Unit IDs
5LZS|1|5|G|3944
5LZS|1|5|A|3945
5LZS|1|5|G|3946
5LZS|1|5|A|3947
5LZS|1|5|C|3948
5LZS|1|5|G|4065
5LZS|1|5|U|4066
5LZS|1|5|U|4067
5LZS|1|5|U|4068
5LZS|1|5|U|4069
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain BB
- 40S ribosomal protein S3a
- Chain i
- 60S ribosomal protein L36
Coloring options: