HL_5LZS_124
3D structure
- PDB id
- 5LZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- UGUAACAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5LZS_124 not in the Motif Atlas
- Homologous match to HL_8P9A_140
- Geometric discrepancy: 0.1968
- The information below is about HL_8P9A_140
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_98423.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
5LZS|1|5|U|2006
5LZS|1|5|G|2007
5LZS|1|5|U|2008
5LZS|1|5|A|2009
5LZS|1|5|A|2010
5LZS|1|5|C|2011
5LZS|1|5|A|2012
5LZS|1|5|A|2013
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain ii
- Transfer RNA; tRNA
- Chain m
- eL40
- Chain s
- uL10
- Chain t
- uL11
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