HL_5LZT_005
3D structure
- PDB id
- 5LZT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- ACUUUUAAU
- Length
- 9 nucleotides
- Bulged bases
- 5LZT|1|3|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5LZT_005 not in the Motif Atlas
- Homologous match to HL_5E81_212
- Geometric discrepancy: 0.2211
- The information below is about HL_5E81_212
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.5
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 50
Unit IDs
5LZT|1|3|A|31
5LZT|1|3|C|32
5LZT|1|3|U|33
5LZT|1|3|U|34
5LZT|1|3|U|35
5LZT|1|3|U|36
5LZT|1|3|A|37
5LZT|1|3|A|38
5LZT|1|3|U|39
Current chains
- Chain 3
- E-site tRNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain 9
- Small subunit ribosomal RNA; SSU rRNA
- Chain FF
- uS7
- Chain OO
- uS11
- Chain cc
- eS28
- Chain hh
- mRNA (UGA stop codon)
Coloring options: