3D structure

PDB id
5LZT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.65 Å

Loop

Sequence
GAGACGUUUU
Length
10 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_5LZT_060 not in the Motif Atlas
Geometric match to HL_5TBW_226
Geometric discrepancy: 0.3578
The information below is about HL_5TBW_226
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_59342.2
Basepair signature
cWW-F-F-F-F-cWW-F-F
Number of instances in this motif group
5

Unit IDs

5LZT|1|5|G|3944
5LZT|1|5|A|3945
5LZT|1|5|G|3946
5LZT|1|5|A|3947
5LZT|1|5|C|3948
5LZT|1|5|G|4065
5LZT|1|5|U|4066
5LZT|1|5|U|4067
5LZT|1|5|U|4068
5LZT|1|5|U|4069

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain BB
eS1
Chain i
eL36

Coloring options:


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