HL_5LZX_025
3D structure
- PDB id
- 5LZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.67 Å
Loop
- Sequence
- CCUUCCAGUCCG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5LZX_025 not in the Motif Atlas
- Geometric match to HL_2Y8W_001
- Geometric discrepancy: 0.318
- The information below is about HL_2Y8W_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81100.2
- Basepair signature
- cWW
- Number of instances in this motif group
- 3
Unit IDs
5LZX|1|5|C|1436
5LZX|1|5|C|1437
5LZX|1|5|U|1438
5LZX|1|5|U|1440
5LZX|1|5|C|1441
5LZX|1|5|C|1442
5LZX|1|5|A|1443
5LZX|1|5|G|1444
5LZX|1|5|U|1445
5LZX|1|5|C|1446
5LZX|1|5|C|1447
5LZX|1|5|G|1448
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain C
- uL4
- Chain F
- uL30
- Chain Q
- eL18
- Chain b
- eL29
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