HL_5LZY_067
3D structure
- PDB id
- 5LZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.99 Å
Loop
- Sequence
- UUUGGGUUUUA
- Length
- 11 nucleotides
- Bulged bases
- 5LZY|1|5|U|4354
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5LZY_067 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.3056
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
5LZY|1|5|U|4352
5LZY|1|5|U|4353
5LZY|1|5|U|4354
5LZY|1|5|G|4355
5LZY|1|5|G|4356
5LZY|1|5|G|4357
5LZY|1|5|U|4358
5LZY|1|5|U|4359
5LZY|1|5|U|4360
5LZY|1|5|U|4361
5LZY|1|5|A|4362
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain L
- eL13
- Chain a
- uL15
- Chain i
- 60S ribosomal protein L36
- Chain o
- eL42
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