HL_5M1J_108

3D structure

PDB id

5M1J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nonstop ribosomal complex bound with Dom34 and Hbs1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUAGAGAAGGGGGCAACUCCAUCUCAGA

Length

28 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5M1J|1|22|U|1687
5M1J|1|22|U|1688
5M1J|1|22|A|1689
5M1J|1|22|G|1690
5M1J|1|22|A|1691
5M1J|1|22|G|1692
5M1J|1|22|A|1693
5M1J|1|22|A|1694
5M1J|1|22|G|1695
5M1J|1|22|G|1696
5M1J|1|22|G|1697
5M1J|1|22|G|1698
5M1J|1|22|G|1699
5M1J|1|22|C|1700
5M1J|1|22|A|1701
5M1J|1|22|A|1702
5M1J|1|22|C|1703
5M1J|1|22|U|1704
5M1J|1|22|C|1705
5M1J|1|22|C|1706
5M1J|1|22|A|1707
5M1J|1|22|U|1708
5M1J|1|22|C|1709
5M1J|1|22|U|1710
5M1J|1|22|C|1711
5M1J|1|22|A|1712
5M1J|1|22|G|1713
5M1J|1|22|A|1714

Current chains

Chain 22

18S ribosomal RNA

Nearby chains

Chain G2

40S ribosomal protein S6-A

Chain W5

60S ribosomal protein L24-A