HL_5MC6_065

3D structure

PDB id

5MC6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAGUGUGUAACAACUC

Length

16 nucleotides

Bulged bases

5MC6|1|BQ|A|1263

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MC6|1|BQ|G|1262
5MC6|1|BQ|A|1263
5MC6|1|BQ|G|1264
5MC6|1|BQ|U|1265
5MC6|1|BQ|G|1266
5MC6|1|BQ|U|1267
5MC6|1|BQ|G|1268
5MC6|1|BQ|U|1269
5MC6|1|BQ|A|1270
5MC6|1|BQ|A|1271
5MC6|1|BQ|C|1272
5MC6|1|BQ|A|1273
5MC6|1|BQ|A|1274
5MC6|1|BQ|C|1275
5MC6|1|BQ|U|1276
5MC6|1|BQ|C|1277

Current chains

Chain BQ

25S ribosomal RNA

Nearby chains