HL_5ME1_033
3D structure
- PDB id
- 5ME1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 30S Pre-Initiation Complex 2 (30S IC-2) Stalled by GE81112
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.5 Å
Loop
- Sequence
- CAGCCUGG(H2U)AG
- Length
- 11 nucleotides
- Bulged bases
- 5ME1|1|X|U|17|||A, 5ME1|1|X|G|18, 5ME1|1|X|G|19
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5ME1_033 not in the Motif Atlas
- Homologous match to HL_3KFU_004
- Geometric discrepancy: 0.221
- The information below is about HL_3KFU_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5ME1|1|X|C|13
5ME1|1|X|A|14
5ME1|1|X|G|15
5ME1|1|X|C|16
5ME1|1|X|C|17
5ME1|1|X|U|17|||A
5ME1|1|X|G|18
5ME1|1|X|G|19
5ME1|1|X|H2U|20
5ME1|1|X|A|21
5ME1|1|X|G|22
Current chains
- Chain X
- fMet-tRNA
Nearby chains
- Chain Y
- Translation initiation factor IF-3
- Chain Z
- Translation initiation factor IF-3
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