HL_5MEI_147

3D structure

PDB id

5MEI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Agelastatin A bound to the 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUUAGAGAAGGGGGCAACUCCAUCUCAGAG

Length

30 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MEI|1|A|C|1686
5MEI|1|A|U|1687
5MEI|1|A|U|1688
5MEI|1|A|A|1689
5MEI|1|A|G|1690
5MEI|1|A|A|1691
5MEI|1|A|G|1692
5MEI|1|A|A|1693
5MEI|1|A|A|1694
5MEI|1|A|G|1695
5MEI|1|A|G|1696
5MEI|1|A|G|1697
5MEI|1|A|G|1698
5MEI|1|A|G|1699
5MEI|1|A|C|1700
5MEI|1|A|A|1701
5MEI|1|A|A|1702
5MEI|1|A|C|1703
5MEI|1|A|U|1704
5MEI|1|A|C|1705
5MEI|1|A|C|1706
5MEI|1|A|A|1707
5MEI|1|A|U|1708
5MEI|1|A|C|1709
5MEI|1|A|U|1710
5MEI|1|A|C|1711
5MEI|1|A|A|1712
5MEI|1|A|G|1713
5MEI|1|A|A|1714
5MEI|1|A|G|1715

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain 7

60S ribosomal protein L24-A

Chain H

40S ribosomal protein S6-A