Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_5MEI_0011/1/38:45No text annotation
geometric
HL_5TBW_001
NA
HL_5MEI_0021/1/69:74No text annotation
homologous
HL_5TBW_002
NA
HL_5MEI_0031/1/90:96No text annotation
homologous
HL_8C3A_003
NA
HL_5MEI_0041/1/132:136No text annotation
homologous
HL_5TBW_004
NA
HL_5MEI_0051/1/194:201T-loop with 2 stacked bulged bases
homologous
HL_5TBW_005
NA
HL_5MEI_0061/1/208:212No text annotation
homologous
HL_8C3A_006
NA
HL_5MEI_0071/1/216:224T-loop with unstacked turn
homologous
HL_5TBW_007
NA
HL_5MEI_0081/1/278:287No text annotation
homologous
HL_5TBW_008
NA
HL_5MEI_0091/1/303:312Pseudoknot geometry
homologous
HL_5TBW_009
NA
HL_5MEI_0101/1/357:362GNRA
homologous
HL_5TBW_010
NA
HL_5MEI_0111/1/382:387GNRA
homologous
HL_5TBW_011
NA
HL_5MEI_2471/1/543:548No text annotation
homologous
HL_8P9A_231
HL_13189.1
HL_5MEI_0131/1/599:604GNRA
homologous
HL_5TBW_013
NA
HL_5MEI_0141/1/640:649T-loop with 2 stacked bulged bases
homologous
HL_5TBW_014
NA
HL_5MEI_0151/1/686:694No text annotation
homologous
HL_5TBW_015
NA
HL_5MEI_0161/1/707:712GNRA
homologous
HL_8C3A_016
NA
HL_5MEI_0171/1/732:737GNRA
homologous
HL_5TBW_017
NA
HL_5MEI_0181/1/763:768No text annotation
homologous
HL_5TBW_018
NA
HL_5MEI_0191/1/844:849GNRA
homologous
HL_5TBW_019
NA
HL_5MEI_0201/1/876:885No text annotation
homologous
HL_5TBW_020
NA
HL_5MEI_0211/1/910:918No text annotation
homologous
HL_5TBW_021
NA
HL_5MEI_0221/1/958:963Externally structured
homologous
HL_5TBW_022
NA
HL_5MEI_0231/1/1023:1029GNRA
homologous
HL_5TBW_023
NA
HL_5MEI_0241/1/1076:1083No text annotation
geometric
HL_5TBW_024
NA
HL_5MEI_0251/1/1126:1132GNRA
homologous
HL_5TBW_025
NA
HL_5MEI_0261/1/1148:1155No text annotation
homologous
HL_8C3A_026
NA
HL_5MEI_0271/1/1239:1249No text annotation
homologous
HL_5TBW_027
NA
HL_5MEI_2271/1/1262:1277No text annotation
geometric
HL_5TBW_227
NA
HL_5MEI_0281/1/1266:1275No text annotation
homologous
HL_5TBW_028
NA
HL_5MEI_0291/1/1347:1357No text annotation
homologous
HL_5TBW_029
NA
HL_5MEI_0301/1/1403:1408GNRA
homologous
HL_5TBW_030
NA
HL_5MEI_0311/1/1462:1470T-loop with 2 stacked bulged bases
homologous
HL_5TBW_031
NA
HL_5MEI_0321/1/1506:1512Pseudoknot geometry with 3' bulge
homologous
HL_5TBW_032
NA
HL_5MEI_0331/1/1544:1549GNRA variation
homologous
HL_5TBW_033
NA
HL_5MEI_0351/1/1599:1608No text annotation
homologous
HL_5TBW_035
NA
HL_5MEI_0361/1/1634:1639GNRA
homologous
HL_5TBW_036
NA
HL_5MEI_0371/1/1680:1688No text annotation
homologous
HL_5TBW_037
NA
HL_5MEI_0381/1/1719:1725No text annotation
homologous
HL_5TBW_038
NA
HL_5MEI_0391/1/1759:1766No text annotation
homologous
HL_8P9A_150
HL_25967.2
HL_5MEI_0401/1/1792:1796Mini UNCG
homologous
HL_5TBW_040
NA
HL_5MEI_0411/1/1844:1851No text annotation
homologous
HL_5TBW_041
NA
HL_5MEI_0421/1/1862:1868GNRA
homologous
HL_5TBW_042
NA
HL_5MEI_0431/1/1923:1928UNCG
geometric
HL_5TBW_043
NA
HL_5MEI_0451/1/2110:2114No text annotation
homologous
HL_5TBW_045
NA
HL_5MEI_0461/1/2135:2145No text annotation
homologous
HL_5TBW_046
NA
HL_5MEI_0471/1/2164:2170GNRA
homologous
HL_5TBW_047
NA
HL_5MEI_0481/1/2220:2225GNRA
homologous
HL_5TBW_048
NA
HL_5MEI_0491/1/2253:2263No text annotation
homologous
HL_5TBW_049
NA
HL_5MEI_0501/1/2292:2300No text annotation
homologous
HL_5TBW_050
NA
HL_5MEI_0511/1/2369:2378No text annotation
homologous
HL_5TBW_051
NA
HL_5MEI_0531/1/2568:2573No text annotation
homologous
HL_5TBW_053
NA
HL_5MEI_0541/1/2616:2624No text annotation
homologous
HL_5TBW_054
NA
HL_5MEI_0551/1/2633:2645No text annotation
homologous
HL_5TBW_055
NA
HL_5MEI_0561/1/2673:2681No text annotation
homologous
HL_5TBW_056
NA
HL_5MEI_0571/1/2693:2700Pseudoknot geometry
homologous
HL_5TBW_057
NA
HL_5MEI_0581/1/2724:2732No text annotation
homologous
HL_5TBW_058
NA
HL_5MEI_0591/1/2744:2749GNRA
homologous
HL_5TBW_059
NA
HL_5MEI_0601/1/2776:2784Pseudoknot geometry
homologous
HL_5TBW_060
NA
HL_5MEI_0611/1/2840:2848No text annotation
homologous
HL_5TBW_061
NA
HL_5MEI_0621/1/2897:2904No text annotation
homologous
HL_5TBW_062
NA
HL_5MEI_0631/1/2920:2926No text annotation
homologous
HL_5TBW_063
NA
HL_5MEI_0641/1/2963:2968GNRA
homologous
HL_5TBW_064
NA
HL_5MEI_0651/1/3025:3030GNRA
homologous
HL_5TBW_065
NA
HL_5MEI_0661/1/3068:3073Ribsomal LSU H95
homologous
HL_5TBW_066
NA
HL_5MEI_0671/1/3110:3124No text annotation
homologous
HL_5TBW_067
NA
HL_5MEI_0681/1/3194:3197No text annotation
geometric
HL_5TBW_068
NA
HL_5MEI_0691/1/3240:3247No text annotation
homologous
HL_5TBW_069
NA
HL_5MEI_0701/1/3303:3311No text annotation
homologous
HL_5TBW_070
NA
HL_5MEI_0711/1/3350:3353Mini UNCG
homologous
HL_5TBW_071
NA
HL_5MEI_2281/3/32:45No text annotation
homologous
HL_8P9A_183
HL_13971.1
HL_5MEI_0721/3/36:41No text annotation
homologous
HL_5TBW_185
NA
HL_5MEI_0731/3/88:93GNRA
homologous
HL_5TBW_186
NA
HL_5MEI_2291/4/47:56No text annotation
homologous
HL_8P4V_072
NA
HL_5MEI_2301/4/69:89No text annotation
homologous
HL_8P4V_073
NA
HL_5MEI_0741/4/73:78GNRA variation
homologous
HL_5TBW_074
NA
HL_5MEI_0751/4/108:114No text annotation
homologous
HL_5TBW_075
NA
HL_5MEI_0761/4/124:129No text annotation
homologous
HL_5TBW_076
NA
HL_5MEI_0771/6/7:17No text annotation
homologous
HL_4V88_186
NA
HL_5MEI_0781/6/70:81No text annotation
homologous
HL_4V88_187
NA
HL_5MEI_0791/6/154:160GNRA related
homologous
HL_4V88_188
NA
HL_5MEI_0811/6/243:250T-loop with 1 bulged base
homologous
HL_4V88_191
NA
HL_5MEI_0821/6/276:279Mini UNCG
homologous
HL_4V88_192
NA
HL_5MEI_0831/6/330:338GNRA related
homologous
HL_4V88_193
NA
HL_5MEI_0841/6/368:373No text annotation
homologous
HL_4V88_194
NA
HL_5MEI_0851/6/393:404No text annotation
homologous
HL_4V88_195
NA
HL_5MEI_0861/6/414:419UNCG
homologous
HL_4V88_196
NA
HL_5MEI_0871/6/450:456No text annotation
homologous
HL_4V88_197
NA
HL_5MEI_2481/6/486:501No text annotation
homologous
HL_8P9A_234
HL_64292.1
HL_5MEI_0891/6/520:532No text annotation
geometric
HL_4V88_199
NA
HL_5MEI_0901/6/569:574GNRA variation
homologous
HL_4V88_200
NA
HL_5MEI_2321/6/715:723No text annotation
homologous
HL_8P9A_235
HL_20535.2
HL_5MEI_0931/6/764:772No text annotation
homologous
HL_4V88_203
NA
HL_5MEI_0941/6/777:783No text annotation
homologous
HL_4V88_204
NA
HL_5MEI_2491/6/829:843No text annotation
homologous
HL_8P9A_236
HL_88364.2
HL_5MEI_0961/6/900:909No text annotation
homologous
HL_4V88_206
NA
HL_5MEI_0971/6/937:942GNRA
homologous
HL_4V88_207
NA
HL_5MEI_0981/6/997:1007No text annotation
homologous
HL_4V88_208
NA
HL_5MEI_0991/6/1055:1064No text annotation
homologous
HL_4V88_209
NA
HL_5MEI_1001/6/1084:1089GNRA
homologous
HL_4V88_210
NA
HL_5MEI_1011/6/1121:1126GNRA
homologous
HL_4V88_211
NA
HL_5MEI_1021/6/1188:1197No text annotation
homologous
HL_4V88_212
NA
HL_5MEI_1031/6/1238:1247Anticodon loop related
homologous
HL_4V88_213
NA
HL_5MEI_1041/6/1296:1301GNRA
homologous
HL_4V88_214
NA
HL_5MEI_1051/6/1309:1316No text annotation
homologous
HL_4V88_215
NA
HL_5MEI_1061/6/1359:1364No text annotation
homologous
HL_4V88_216
NA
HL_5MEI_1071/6/1396:1402GNRA
homologous
HL_4V88_217
NA
HL_5MEI_1081/6/1501:1506GNRA
homologous
HL_4V88_218
NA
HL_5MEI_1091/6/1550:1561No text annotation
homologous
HL_4V88_219
NA
HL_5MEI_1101/6/1594:1602No text annotation
homologous
HL_4V88_220
NA
HL_5MEI_1111/6/1691:1710No text annotation
homologous
HL_8P9A_224
HL_89346.1
HL_5MEI_1121/6/1778:1783GNRA variation
homologous
HL_4V88_222
NA
HL_5MEI_1131/A/7:17No text annotation
geometric
HL_4V88_186
NA
HL_5MEI_1141/A/70:81No text annotation
geometric
HL_5TBW_006
NA
HL_5MEI_1151/A/154:160GNRA related
geometric
HL_4V88_188
NA
HL_5MEI_1181/A/243:250T-loop with 1 bulged base
geometric
HL_4V88_191
NA
HL_5MEI_1191/A/274:282No text annotation
HL_5MEI_1201/A/330:338GNRA related
geometric
HL_4V88_193
NA
HL_5MEI_1211/A/368:373No text annotation
geometric
HL_4V88_194
NA
HL_5MEI_1221/A/393:404No text annotation
geometric
HL_4V88_195
NA
HL_5MEI_1231/A/414:419UNCG
geometric
HL_4V88_196
NA
HL_5MEI_1241/A/450:456No text annotation
geometric
HL_5NFV_001
HL_69752.2
HL_5MEI_2501/A/480:508No text annotation
HL_5MEI_1251/A/485:502No text annotation
HL_5MEI_1261/A/520:532No text annotation
geometric
HL_4V88_199
NA
HL_5MEI_1271/A/569:574GNRA variation
geometric
HL_4V88_200
NA
HL_5MEI_1281/A/703:735No text annotation
HL_5MEI_1291/A/764:772No text annotation
geometric
HL_4V88_203
NA
HL_5MEI_2511/A/777:783No text annotation
homologous
HL_8P9A_207
HL_48417.6
HL_5MEI_1311/A/829:843Pseudoknot geometry
geometric
HL_4V88_205
NA
HL_5MEI_1321/A/900:909No text annotation
geometric
HL_4V88_206
NA
HL_5MEI_1331/A/937:942GNRA
geometric
HL_4V88_207
NA
HL_5MEI_1341/A/997:1007No text annotation
geometric
HL_4V88_208
NA
HL_5MEI_1351/A/1055:1064No text annotation
HL_5MEI_1361/A/1084:1089GNRA
geometric
HL_4V88_210
NA
HL_5MEI_1371/A/1121:1126GNRA
geometric
HL_4LFB_020
HL_37824.8
HL_5MEI_1381/A/1188:1197No text annotation
geometric
HL_4V88_212
NA
HL_5MEI_1391/A/1238:1247Anticodon loop related
geometric
HL_4V88_213
NA
HL_5MEI_1401/A/1296:1301GNRA
geometric
HL_4V88_214
NA
HL_5MEI_1411/A/1309:1316No text annotation
geometric
HL_4V88_215
NA
HL_5MEI_1421/A/1359:1364No text annotation
homologous
HL_8C3A_221
NA
HL_5MEI_1431/A/1396:1402GNRA
geometric
HL_5J7L_026
HL_93535.1
HL_5MEI_1441/A/1501:1506GNRA
geometric
HL_4V88_211
NA
HL_5MEI_1451/A/1550:1561No text annotation
geometric
HL_4V88_219
NA
HL_5MEI_1461/A/1594:1602No text annotation
geometric
HL_4V88_220
NA
HL_5MEI_1481/A/1778:1783GNRA variation
geometric
HL_4V88_222
NA
HL_5MEI_1491/AR/38:45No text annotation
homologous
HL_5TBW_001
NA
HL_5MEI_1501/AR/69:74No text annotation
homologous
HL_5TBW_002
NA
HL_5MEI_1511/AR/90:96No text annotation
homologous
HL_5TBW_003
NA
HL_5MEI_1521/AR/132:136No text annotation
homologous
HL_5TBW_004
NA
HL_5MEI_1531/AR/194:201T-loop with 2 stacked bulged bases
homologous
HL_5TBW_005
NA
HL_5MEI_1541/AR/208:212No text annotation
homologous
HL_8C3A_006
NA
HL_5MEI_1551/AR/216:224T-loop with unstacked turn
homologous
HL_5TBW_007
NA
HL_5MEI_1561/AR/278:287No text annotation
homologous
HL_8C3A_008
NA
HL_5MEI_1571/AR/303:312Pseudoknot geometry
homologous
HL_5TBW_009
NA
HL_5MEI_1581/AR/357:362GNRA
homologous
HL_5TBW_010
NA
HL_5MEI_1591/AR/382:387GNRA
homologous
HL_5TBW_011
NA
HL_5MEI_2361/AR/542:549No text annotation
homologous
HL_8P9A_124
NA
HL_5MEI_1611/AR/599:604GNRA
homologous
HL_5TBW_013
NA
HL_5MEI_1621/AR/640:649T-loop with 2 stacked bulged bases
homologous
HL_5TBW_014
NA
HL_5MEI_2371/AR/687:693No text annotation
geometric
HL_5J7L_151
HL_80922.2
HL_5MEI_1641/AR/707:712GNRA
homologous
HL_5TBW_016
NA
HL_5MEI_1651/AR/732:737GNRA
homologous
HL_5TBW_017
NA
HL_5MEI_1661/AR/763:768No text annotation
geometric
HL_5TBW_018
NA
HL_5MEI_1671/AR/844:849GNRA
homologous
HL_5TBW_019
NA
HL_5MEI_1681/AR/876:885No text annotation
homologous
HL_5TBW_020
NA
HL_5MEI_1691/AR/910:918No text annotation
homologous
HL_8C3A_021
NA
HL_5MEI_1701/AR/958:963Externally structured
homologous
HL_5TBW_022
NA
HL_5MEI_1711/AR/1023:1029GNRA
homologous
HL_5TBW_023
NA
HL_5MEI_1721/AR/1076:1083No text annotation
homologous
HL_5TBW_024
NA
HL_5MEI_1731/AR/1126:1132GNRA
homologous
HL_5TBW_025
NA
HL_5MEI_1741/AR/1148:1155No text annotation
homologous
HL_5TBW_026
NA
HL_5MEI_2391/AR/1239:1249No text annotation
homologous
HL_8P9A_139
HL_19210.3
HL_5MEI_2401/AR/1262:1277No text annotation
geometric
HL_5TBW_227
NA
HL_5MEI_1761/AR/1267:1274GNRA wlth tandem sheared
homologous
HL_8C3A_028
NA
HL_5MEI_1771/AR/1347:1357No text annotation
homologous
HL_5TBW_029
NA
HL_5MEI_1781/AR/1403:1408GNRA
homologous
HL_5TBW_030
NA
HL_5MEI_1791/AR/1462:1470T-loop with 2 stacked bulged bases
homologous
HL_5TBW_031
NA
HL_5MEI_1801/AR/1506:1512Pseudoknot geometry with 3' bulge
homologous
HL_5TBW_032
NA
HL_5MEI_1811/AR/1544:1549GNRA variation
homologous
HL_5TBW_033
NA
HL_5MEI_1831/AR/1599:1608No text annotation
homologous
HL_5TBW_035
NA
HL_5MEI_1841/AR/1634:1639GNRA
homologous
HL_5TBW_036
NA
HL_5MEI_1851/AR/1680:1688No text annotation
homologous
HL_5TBW_037
NA
HL_5MEI_1861/AR/1719:1725No text annotation
homologous
HL_5TBW_038
NA
HL_5MEI_2411/AR/1759:1766No text annotation
homologous
HL_8P9A_150
HL_25967.2
HL_5MEI_1881/AR/1792:1796Mini UNCG
homologous
HL_5TBW_040
NA
HL_5MEI_1891/AR/1844:1851No text annotation
homologous
HL_8C3A_041
NA
HL_5MEI_1901/AR/1862:1868GNRA
homologous
HL_5TBW_042
NA
HL_5MEI_1911/AR/1923:1928No text annotation
geometric
HL_7RQB_042
NA
HL_5MEI_1931/AR/2110:2114No text annotation
homologous
HL_5TBW_045
NA
HL_5MEI_1941/AR/2135:2145No text annotation
homologous
HL_5TBW_046
NA
HL_5MEI_1951/AR/2164:2170GNRA
homologous
HL_8C3A_047
NA
HL_5MEI_1961/AR/2220:2225GNRA
homologous
HL_5TBW_048
NA
HL_5MEI_1971/AR/2253:2263No text annotation
homologous
HL_5TBW_049
NA
HL_5MEI_1981/AR/2292:2300No text annotation
homologous
HL_5TBW_050
NA
HL_5MEI_1991/AR/2369:2378No text annotation
homologous
HL_5TBW_051
NA
HL_5MEI_2011/AR/2534:2545No text annotation
homologous
HL_8P9A_163
HL_23509.1
HL_5MEI_2431/AR/2567:2574No text annotation
homologous
HL_8C3A_054
NA
HL_5MEI_2021/AR/2568:2573No text annotation
homologous
HL_5TBW_053
NA
HL_5MEI_2031/AR/2616:2624No text annotation
homologous
HL_8C3A_055
NA
HL_5MEI_2041/AR/2633:2645No text annotation
homologous
HL_5TBW_055
NA
HL_5MEI_2051/AR/2673:2681No text annotation
homologous
HL_5TBW_056
NA
HL_5MEI_2061/AR/2693:2700Pseudoknot geometry
homologous
HL_5TBW_057
NA
HL_5MEI_2071/AR/2724:2732No text annotation
homologous
HL_5TBW_058
NA
HL_5MEI_2081/AR/2744:2749GNRA
homologous
HL_5TBW_059
NA
HL_5MEI_2091/AR/2776:2784Pseudoknot geometry
homologous
HL_5TBW_060
NA
HL_5MEI_2101/AR/2840:2848No text annotation
homologous
HL_5TBW_061
NA
HL_5MEI_2111/AR/2897:2904No text annotation
homologous
HL_5TBW_062
NA
HL_5MEI_2121/AR/2920:2926No text annotation
geometric
HL_5TBW_063
NA
HL_5MEI_2131/AR/2963:2968GNRA
homologous
HL_8C3A_065
NA
HL_5MEI_2141/AR/3025:3030GNRA
geometric
HL_4V9F_023
HL_37824.8
HL_5MEI_2151/AR/3068:3073Ribsomal LSU H95
homologous
HL_5TBW_066
NA
HL_5MEI_2161/AR/3110:3124No text annotation
homologous
HL_5TBW_067
NA
HL_5MEI_2441/AR/3193:3199No text annotation
homologous
HL_8P9A_179
HL_08100.1
HL_5MEI_2171/AR/3194:3197No text annotation
homologous
HL_5TBW_068
NA
HL_5MEI_2181/AR/3240:3247No text annotation
homologous
HL_5TBW_069
NA
HL_5MEI_2191/AR/3303:3311No text annotation
homologous
HL_5TBW_070
NA
HL_5MEI_2201/AR/3350:3353Mini UNCG
geometric
HL_5TBW_071
NA
HL_5MEI_2451/AS/32:45No text annotation
homologous
HL_8P9A_183
HL_13971.1
HL_5MEI_2211/AS/36:41No text annotation
geometric
HL_5TBW_185
NA
HL_5MEI_2221/AS/88:93GNRA
geometric
HL_5TBW_186
NA
HL_5MEI_2461/AT/47:56No text annotation
homologous
HL_8P4V_072
NA
HL_5MEI_2231/AT/69:89No text annotation
homologous
HL_8P9A_187
HL_51921.1
HL_5MEI_2241/AT/108:114No text annotation
geometric
HL_5TBW_075
NA
HL_5MEI_2251/AT/124:129No text annotation
geometric
HL_5TBW_076
NA

Problematic loops

#loop idProblemSequence
HL_5MEI_226No text annotation
HL_5MEI_012No text annotation
HL_5MEI_034No text annotation
HL_5MEI_044No text annotation
HL_5MEI_052No text annotation
HL_5MEI_080No text annotation
HL_5MEI_088No text annotation
HL_5MEI_231No text annotation
HL_5MEI_091No text annotation
HL_5MEI_092No text annotation
HL_5MEI_233No text annotation
HL_5MEI_095No text annotation
HL_5MEI_116No text annotation
HL_5MEI_234No text annotation
HL_5MEI_117No text annotation
HL_5MEI_235No text annotation
HL_5MEI_130No text annotation
HL_5MEI_147No text annotation
HL_5MEI_252No text annotation
HL_5MEI_160No text annotation
HL_5MEI_163No text annotation
HL_5MEI_238No text annotation
HL_5MEI_175No text annotation
HL_5MEI_182No text annotation
HL_5MEI_187No text annotation
HL_5MEI_192No text annotation
HL_5MEI_242No text annotation
HL_5MEI_200No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_5MEI_0021/1/7:8,
1/4/150:152
Single bulged C
homologous
IL_5TBW_002
NA
IL_5MEI_0031/1/13:15,
1/4/144:145
Single bulged U
homologous
IL_5TBW_003
NA
IL_5MEI_0041/1/27:28,
1/1/56:58
Single stack bend
homologous
IL_5TBW_004
NA
IL_5MEI_0051/1/31:38,
1/1/45:53
tSH-tHW-tHH-tHS
homologous
IL_5TBW_005
NA
IL_5MEI_0061/1/82:89,
1/1/97:103
8x7 Sarcin-Ricin; G-bulge
homologous
IL_5TBW_006
NA
IL_5MEI_0071/1/123:124,
1/1/144:149
No text annotation
homologous
IL_5TBW_007
NA
IL_5MEI_0081/1/125:127,
1/1/141:143
Isolated non-canonical cWW pair
homologous
IL_5TBW_008
NA
IL_5MEI_0091/1/163:165,
1/1/257:258
Single stack bend
homologous
IL_5TBW_009
NA
IL_5MEI_0101/1/169:170,
1/1/248:253
No text annotation
homologous
IL_5TBW_010
NA
IL_5MEI_5051/1/177:178,
1/1/238:241
No text annotation
IL_5MEI_0121/1/189:191,
1/1/204:205
Single bulged U
homologous
IL_5TBW_012
NA
IL_5MEI_0131/1/337:339,
1/4/25:26
Single bulged A
homologous
IL_5TBW_013
NA
IL_5MEI_0141/1/376:379,
1/1/390:403
No text annotation
homologous
IL_5TBW_014
NA
IL_5MEI_0151/1/404:410,
1/4/13:19
Triple sheared with non-canonical cWW
homologous
IL_5TBW_015
NA
IL_5MEI_0161/1/429:431,
1/1/628:630
Isolated non-canonical cWW pair
homologous
IL_5TBW_016
NA
IL_5MEI_0181/1/512:513,
1/1/577:579
Single bulged A
homologous
IL_5TBW_018
NA
IL_5MEI_0191/1/517:525,
1/1/567:573
No text annotation
homologous
IL_5TBW_019
NA
IL_5MEI_0201/1/531:538,
1/1/553:561
No text annotation
homologous
IL_5TBW_020
NA
IL_5MEI_0211/1/668:670,
1/1/792:794
Isolated non-canonical cWW pair
homologous
IL_5TBW_021
NA
IL_5MEI_0221/1/680:684,
1/1/696:700
No text annotation
homologous
IL_5TBW_022
NA
IL_5MEI_0231/1/725:728,
1/1/741:745
UAA/GAN variation
homologous
IL_5TBW_023
NA
IL_5MEI_0241/1/752:753,
1/1/779:781
Single bulged A
homologous
IL_5TBW_024
NA
IL_5MEI_0251/1/755:756,
1/1/775:777
Single bulged U
homologous
IL_5TBW_025
NA
IL_5MEI_0261/1/758:763,
1/1/768:773
No text annotation
geometric
IL_5TBW_026
NA
IL_5MEI_0271/1/803:805,
1/1/938:940
Isolated non-canonical cWW pair
homologous
IL_5TBW_027
NA
IL_5MEI_0281/1/805:809,
1/1/931:938
tHW-tHW cross-strand stack
geometric
IL_5TBW_028
NA
IL_5MEI_0291/1/833:834,
1/1/859:861
Single bulged G
homologous
IL_8C3A_032
NA
IL_5MEI_0301/1/834:838,
1/1/855:859
Triple sheared
geometric
IL_5TBW_030
NA
IL_5MEI_0311/1/869:872,
1/1/888:890
Major groove platform with extra cWW
homologous
IL_8C3A_034
NA
IL_5MEI_0321/1/873:875,
1/1/886:887
Single bulged U
homologous
IL_5TBW_032
NA
IL_5MEI_0331/1/907:909,
1/1/919:923
Multiple bulged bases
geometric
IL_5TBW_033
NA
IL_5MEI_0341/1/954:956,
1/1/965:967
Isolated non-canonical cWW pair
homologous
IL_5TBW_034
NA
IL_5MEI_0351/1/969:970,
1/1/1111:1113
Single stack bend
homologous
IL_5TBW_035
NA
IL_5MEI_0361/1/977:981,
1/1/1102:1104
180 degree turn
homologous
IL_5TBW_036
NA
IL_5MEI_0371/1/983:985,
1/1/1099:1100
Single bulged G
homologous
IL_5TBW_037
NA
IL_5MEI_0381/1/991:997,
1/1/1052:1058
7x7 Sarcin-Ricin with intercalated A; G-bulge
homologous
IL_5TBW_038
NA
IL_5MEI_0391/1/997:998,
1/1/1050:1052
Minor groove platform
geometric
IL_5TBW_039
NA
IL_5MEI_0401/1/999:1004,
1/1/1046:1049
C-loop
homologous
IL_5TBW_040
NA
IL_5MEI_0411/1/1006:1009,
1/1/1041:1044
Tandem non-canonical cWW pairs
geometric
IL_5TBW_041
NA
IL_5MEI_0421/1/1009:1011,
1/1/1039:1041
Isolated non-canonical cWW pair
homologous
IL_5TBW_042
NA
IL_5MEI_5061/1/1014:1018,
1/1/1034:1036
No text annotation
homologous
IL_8P9A_271
IL_11415.1
IL_5MEI_0441/1/1069:1071,
1/1/1087:1089
Isolated non-canonical cWW pair
homologous
IL_5TBW_044
NA
IL_5MEI_0451/1/1074:1076,
1/1/1083:1084
Single bulged A
homologous
IL_5TBW_045
NA
IL_5MEI_0461/1/1120:1122,
1/1/1136:1138
Isolated non-canonical cWW pair
homologous
IL_5TBW_046
NA
IL_5MEI_0481/1/1167:1171,
1/1/1328:1332
UAA/GAN
homologous
IL_5TBW_048
NA
IL_5MEI_0491/1/1173:1180,
1/1/1325:1326
SSU/LSU pseudoknot
homologous
IL_5TBW_049
NA
IL_5MEI_0501/1/1180:1182,
1/1/1324:1325
Single bulged U
geometric
IL_5TBW_050
NA
IL_5MEI_0511/1/1187:1194,
1/1/1314:1319
No text annotation
homologous
IL_5TBW_051
NA
IL_5MEI_0521/1/1194:1205,
1/1/1299:1314
No text annotation
geometric
IL_5TBW_052
NA
IL_5MEI_0531/1/1207:1209,
1/1/1296:1297
Single bulged U
homologous
IL_5TBW_053
NA
IL_5MEI_0541/1/1218:1226,
1/1/1283:1287
Kink-turn
homologous
IL_5TBW_054
NA
IL_5MEI_0551/1/1232:1239,
1/1/1249:1256
No text annotation
geometric
IL_5TBW_055
NA
IL_5MEI_0561/1/1262:1266,
1/1/1275:1277
Major groove platform with extra cWW
geometric
IL_5TBW_056
NA
IL_5MEI_0571/1/1376:1378,
1/1/1428:1431
Isolated cWS basepair
homologous
IL_5TBW_057
NA
IL_5MEI_0581/1/1385:1387,
1/1/1420:1421
Single bulged A
homologous
IL_5TBW_058
NA
IL_5MEI_0591/1/1388:1395,
1/1/1415:1419
Kink-turn
homologous
IL_5TBW_059
NA
IL_5MEI_0601/1/1398:1400,
1/1/1411:1412
Single bulged A
homologous
IL_5TBW_060
NA
IL_5MEI_0611/1/1444:1450,
1/1/2354:2359
7x6 Sarcin-Ricin; G-bulge
homologous
IL_5TBW_061
NA
IL_5MEI_4721/1/1501:1505,
1/1/1513:1515
C-loop
homologous
IL_8P9A_290
IL_63596.11
IL_5MEI_0631/1/1532:1536,
1/1/1585:1590
UAA/GAN
homologous
IL_5TBW_063
NA
IL_5MEI_0641/1/1618:1621,
1/1/1824:1826
Other IL
homologous
IL_5TBW_064
NA
IL_5MEI_5071/1/1623:1624,
1/1/1819:1822
Major groove platform related
homologous
IL_8P9A_293
IL_48076.6
IL_5MEI_0661/1/1627:1631,
1/1/1811:1816
No text annotation
geometric
IL_5TBW_066
NA
IL_5MEI_0671/1/1645:1649,
1/1/1806:1810
Triple sheared
geometric
IL_5TBW_067
NA
IL_5MEI_0681/1/1661:1663,
1/1/1786:1788
Isolated non-canonical cWW pair
homologous
IL_5TBW_068
NA
IL_5MEI_0691/1/1669:1670,
1/1/1778:1780
Single bulged C
homologous
IL_5TBW_069
NA
IL_5MEI_0701/1/1670:1671,
1/1/1776:1778
Single stack bend
geometric
IL_5TBW_070
NA
IL_5MEI_0711/1/1694:1698,
1/1/1747:1752
No text annotation
homologous
IL_5TBW_071
NA
IL_5MEI_0721/1/1702:1707,
1/1/1737:1743
No text annotation
homologous
IL_5TBW_072
NA
IL_5MEI_5081/1/1711:1717,
1/1/1727:1733
No text annotation
homologous
IL_8P9A_301
IL_69543.3
IL_5MEI_0741/1/1883:1889,
1/1/2346:2349
No text annotation
homologous
IL_5TBW_074
NA
IL_5MEI_0751/1/1895:1897,
1/1/2338:2340
Isolated tWW turn
homologous
IL_5TBW_075
NA
IL_5MEI_0761/1/1898:1901,
1/1/2336:2337
Major groove platform; stack outside cWW
homologous
IL_5TBW_076
NA
IL_5MEI_4731/1/1898:1906,
1/1/2333:2337
No text annotation
homologous
IL_8P9A_305
IL_22854.4
IL_5MEI_0771/1/1901:1906,
1/1/2333:2336
Intercalated tWH
geometric
IL_5TBW_077
NA
IL_5MEI_0781/1/1918:1923,
1/1/1928:1934
tSH-tSH-tHH-tHS
homologous
IL_5TBW_078
NA
IL_5MEI_0791/1/1940:1942,
1/1/2106:2108
Isolated non-canonical cWW pair
homologous
IL_5TBW_079
NA
IL_5MEI_0801/1/1947:1948,
1/1/2098:2101
No text annotation
homologous
IL_5TBW_080
NA
IL_5MEI_0811/1/1951:1953,
1/1/2094:2095
Single stack bend
homologous
IL_5TBW_081
NA
IL_5MEI_0821/1/2128:2129,
1/1/2323:2325
Single bulged A
homologous
IL_5TBW_082
NA
IL_5MEI_0831/1/2156:2161,
1/1/2173:2180
Kink-turn related
homologous
IL_5TBW_083
NA
IL_5MEI_0841/1/2196:2199,
1/1/2245:2246
Major groove intercalation
homologous
IL_5TBW_084
NA
IL_5MEI_0851/1/2200:2201,
1/1/2241:2244
Major groove intercalation
homologous
IL_5TBW_085
NA
IL_5MEI_0861/1/2204:2206,
1/1/2237:2238
Single bulged U
geometric
IL_5TBW_086
NA
IL_5MEI_4761/1/2204:2210,
1/1/2235:2238
No text annotation
IL_5MEI_0871/1/2206:2210,
1/1/2235:2237
Major groove platform with extra pair
homologous
IL_5TBW_087
NA
IL_5MEI_0881/1/2211:2217,
1/1/2228:2234
No text annotation
homologous
IL_5TBW_088
NA
IL_5MEI_0891/1/2276:2277,
1/1/2307:2310
Bulged stacked bases
homologous
IL_5TBW_089
NA
IL_5MEI_0901/1/2277:2288,
1/1/2304:2307
No text annotation
homologous
IL_8C3A_095
NA
IL_5MEI_0911/1/2391:2394,
1/1/2986:2988
Major groove platform with extra pair
homologous
IL_5TBW_091
NA
IL_5MEI_0921/1/2396:2398,
1/1/2981:2984
Major groove platform with intercalation
homologous
IL_5TBW_092
NA
IL_5MEI_0931/1/2409:2411,
1/1/2811:2812
Single bulged U
homologous
IL_5TBW_093
NA
IL_5MEI_0941/1/2412:2413,
1/1/2807:2810
Minor groove platform
homologous
IL_5TBW_094
NA
IL_5MEI_0951/1/2423:2425,
1/1/2604:2607
Isolated tHS basepair with bulges
homologous
IL_5TBW_095
NA
IL_5MEI_0961/1/2520:2526,
1/1/2584:2587
No text annotation
homologous
IL_5TBW_096
NA
IL_5MEI_0971/1/2529:2563,
1/1/2578:2581
No text annotation
IL_5MEI_0981/1/2614:2615,
1/1/2625:2627
Single bulged A
homologous
IL_8C3A_107
NA
IL_5MEI_0991/1/2666:2668,
1/1/2686:2690
Isolated tHS basepair with bulges
geometric
IL_5TBW_099
NA
IL_5MEI_1001/1/2718:2721,
1/1/2735:2738
Tandem non-canonical cWW pairs
homologous
IL_5TBW_100
NA
IL_5MEI_1011/1/2770:2773,
1/1/2787:2788
Single stack bend
homologous
IL_5TBW_101
NA
IL_5MEI_1021/1/2823:2824,
1/1/2865:2867
Major groove platform
homologous
IL_5TBW_102
NA
IL_5MEI_4771/1/2823:2826,
1/1/2863:2867
No text annotation
homologous
IL_8C3A_111
NA
IL_5MEI_1031/1/2824:2826,
1/1/2863:2865
Isolated non-canonical cWW pair
geometric
IL_5TBW_103
NA
IL_5MEI_1041/1/2826:2828,
1/1/2862:2863
Major groove platform
homologous
IL_5TBW_104
NA
IL_5MEI_1051/1/2828:2830,
1/1/2858:2862
Major groove minor groove platform with extra cWW
geometric
IL_5TBW_105
NA
IL_5MEI_1061/1/2835:2839,
1/1/2849:2853
Triple sheared
homologous
IL_5TBW_106
NA
IL_5MEI_1071/1/2876:2877,
1/1/2949:2951
Major groove platform
homologous
IL_8C3A_115
NA
IL_5MEI_1081/1/2879:2881,
1/1/2943:2947
Isolated non-canonical cWW with bulges
homologous
IL_5TBW_108
NA
IL_5MEI_1091/1/2881:2882,
1/1/2940:2943
Multiple bulged bases
geometric
IL_5TBW_109
NA
IL_5MEI_1101/1/2889:2891,
1/1/2912:2914
Isolated non-canonical cWW pair
geometric
IL_5TBW_110
NA
IL_5MEI_1111/1/2891:2892,
1/1/2909:2912
Major groove platform with intercalation
homologous
IL_5TBW_111
NA
IL_5MEI_1121/1/2918:2920,
1/1/2926:2928
Isolated non-canonical cWW pair
geometric
IL_5TBW_112
NA
IL_5MEI_1131/1/2960:2961,
1/1/2970:2972
Single bulged A
homologous
IL_5TBW_113
NA
IL_5MEI_1141/1/3004:3007,
1/1/3139:3144
Double sheared
homologous
IL_5TBW_114
NA
IL_5MEI_1151/1/3012:3014,
1/1/3040:3042
Isolated non-canonical cWW pair
homologous
IL_5TBW_115
NA
IL_5MEI_1161/1/3018:3025,
1/1/3030:3036
8x7 Sarcin-Ricin; G-bulge
geometric
IL_5TBW_116
NA
IL_5MEI_1171/1/3047:3051,
1/1/3091:3094
Major groove minor groove platform with tHH
homologous
IL_5TBW_117
NA
IL_5MEI_1181/1/3054:3059,
1/1/3084:3088
UAA/GAN related
homologous
IL_5TBW_118
NA
IL_5MEI_1191/1/3063:3064,
1/1/3077:3080
Multiple bulged bases
homologous
IL_5TBW_119
NA
IL_5MEI_1201/1/3103:3107,
1/1/3127:3131
UAA/GAN
homologous
IL_5TBW_120
NA
IL_5MEI_5091/1/3163:3166,
1/1/3284:3287
No text annotation
geometric
IL_8BH9_001
IL_51479.1
IL_5MEI_1221/1/3168:3170,
1/1/3280:3282
Isolated non-canonical cWW pair
homologous
IL_5TBW_122
NA
IL_5MEI_1231/1/3177:3179,
1/1/3210:3211
Single bulged A
homologous
IL_5TBW_123
NA
IL_5MEI_1241/1/3179:3188,
1/1/3204:3210
No text annotation
geometric
IL_5TBW_124
NA
IL_5MEI_1251/1/3193:3194,
1/1/3197:3199
Single bulged U
homologous
IL_5TBW_125
NA
IL_5MEI_1261/1/3225:3229,
1/1/3258:3260
No text annotation
homologous
IL_5TBW_126
NA
IL_5MEI_1271/1/3233:3235,
1/1/3252:3254
Isolated non-canonical cWW pair
geometric
IL_5TBW_127
NA
IL_5MEI_1281/1/3235:3238,
1/1/3249:3252
Tandem non-canonical cWW pairs
homologous
IL_5TBW_128
NA
IL_5MEI_1291/1/3300:3303,
1/1/3311:3314
Tandem non-canonical cWW pairs
geometric
IL_5TBW_129
NA
IL_5MEI_1301/1/3318:3320,
1/1/3387:3388
Single bulged U
geometric
IL_5TBW_130
NA
IL_5MEI_1311/1/3324:3325,
1/1/3381:3383
Single bulged U
homologous
IL_5TBW_131
NA
IL_5MEI_1321/1/3328:3330,
1/1/3373:3378
Isolated non-canonical cWW pair
homologous
IL_5TBW_132
NA
IL_5MEI_1331/1/3332:3337,
1/1/3367:3371
No text annotation
homologous
IL_5TBW_133
NA
IL_5MEI_1341/1/3340:3342,
1/1/3363:3364
Single bulged U
geometric
IL_5TBW_134
NA
IL_5MEI_1351/1/3342:3345,
1/1/3360:3363
Double sheared; A in syn
geometric
IL_5TBW_135
NA
IL_5MEI_4791/1/3345:3350,
1/1/3353:3360
No text annotation
geometric
IL_5TBW_476
NA
IL_5MEI_1371/1/3349:3350,
1/1/3353:3356
Multiple bulged bases
geometric
IL_5TBW_136
NA
IL_5MEI_1381/3/15:16,
1/3/63:65
Single bulged A
homologous
IL_5TBW_372
NA
IL_5MEI_1391/3/21:27,
1/3/53:58
Minor groove platform related
homologous
IL_5TBW_373
NA
IL_5MEI_1401/3/28:29,
1/3/49:52
Minor groove platform
geometric
IL_5TBW_374
NA
IL_5MEI_1411/3/29:30,
1/3/47:49
Single stack bend
homologous
IL_5TBW_375
NA
IL_5MEI_1421/3/32:36,
1/3/41:45
Symmetric double minor groove platform
geometric
IL_5TBW_376
NA
IL_5MEI_1431/3/72:80,
1/3/100:106
8x7 Sarcin-Ricin; G-bulge
homologous
IL_5TBW_377
NA
IL_5MEI_1441/3/84:87,
1/3/94:96
Isolated non-canonical cWW pair
homologous
IL_5TBW_378
NA
IL_5MEI_1451/4/44:64,
1/4/96:100
No text annotation
geometric
IL_5TBW_144
NA
IL_5MEI_1461/4/64:66,
1/4/93:96
Isolated non-canonical cWW pair
homologous
IL_5TBW_145
NA
IL_5MEI_1471/4/68:69,
1/4/89:91
Single bulged U
homologous
IL_5TBW_146
NA
IL_5MEI_1481/4/69:73,
1/4/78:89
Kink-turn related
geometric
IL_5TBW_147
NA
IL_5MEI_1491/6/24:26,
1/6/600:601
Single bulged C
homologous
IL_4V88_384
NA
IL_5MEI_1501/6/35:37,
1/6/471:473
Isolated non-canonical cWW pair
geometric
IL_4V88_385
NA
IL_5MEI_1511/6/37:41,
1/6/466:471
Triple sheared related
geometric
IL_4V88_386
NA
IL_5MEI_1521/6/42:48,
1/6/431:433
No text annotation
geometric
IL_4V88_387
NA
IL_5MEI_1531/6/50:52,
1/6/428:429
Minor groove platform
homologous
IL_4V88_388
NA
IL_5MEI_1541/6/58:63,
1/6/87:89
No text annotation
geometric
IL_4V88_389
NA
IL_5MEI_4801/6/64:69,
1/6/82:86
No text annotation
homologous
IL_8P9A_379
IL_21667.1
IL_5MEI_1561/6/109:112,
1/6/302:305
Tandem non-canonical cWW pairs
homologous
IL_4V88_391
NA
IL_5MEI_1571/6/113:116,
1/6/300:301
Multiple bulged bases
homologous
IL_4V88_392
NA
IL_5MEI_1581/6/117:122,
1/6/295:299
No text annotation
homologous
IL_4V88_393
NA
IL_5MEI_1591/6/143:149,
1/6/165:172
tWH-tWH-tHW-tHW
homologous
IL_4V88_394
NA
IL_5MEI_1601/6/150:152,
1/6/162:164
Isolated non-canonical cWW contact
homologous
IL_4V88_395
NA
IL_5MEI_1621/6/204:206,
1/6/259:263
Major groove platform with extra cWW
homologous
IL_4V88_397
NA
IL_5MEI_1631/6/206:208,
1/6/257:259
Isolated non-canonical cWW pair
geometric
IL_4V88_398
NA
IL_5MEI_1641/6/213:243,
1/6/250:252
No text annotation
IL_5MEI_1651/6/265:267,
1/6/288:289
Single bulged A
homologous
IL_4V88_399
NA
IL_5MEI_1661/6/270:273,
1/6/283:285
No text annotation
homologous
IL_4V88_400
NA
IL_5MEI_1671/6/275:276,
1/6/279:281
Single bulged U
geometric
IL_4V88_401
NA
IL_5MEI_1681/6/311:316,
1/6/348:355
Kink-turn with non-sequential stacking
homologous
IL_4V88_402
NA
IL_5MEI_1691/6/318:323,
1/6/345:346
No text annotation
homologous
IL_4V88_403
NA
IL_5MEI_1701/6/363:365,
1/6/376:381
No text annotation
homologous
IL_4V88_404
NA
IL_5MEI_1711/6/389:391,
1/6/406:408
Isolated cWH basepair
homologous
IL_4V88_405
NA
IL_5MEI_1721/6/411:413,
1/6/420:422
Isolated near basepair
homologous
IL_4V88_406
NA
IL_5MEI_1731/6/439:441,
1/6/463:464
Single bulged U
geometric
IL_4V88_407
NA
IL_5MEI_1741/6/443:447,
1/6/460:461
C-loop
geometric
IL_5J7L_018
IL_03109.3
IL_5MEI_1751/6/447:448,
1/6/458:460
Single bulged G
geometric
IL_5J7L_019
IL_00225.14
IL_5MEI_4821/6/481:482,
1/6/505:507
Single bulged A
homologous
IL_8P9A_399
IL_31462.7
IL_5MEI_4831/6/517:518,
1/6/533:535
Minor groove platform
homologous
IL_8C3A_501
NA
IL_5MEI_1781/6/518:520,
1/6/532:533
Minor groove platform
geometric
IL_4V88_412
NA
IL_5MEI_1791/6/550:557,
1/6/587:588
SSU/LSU pseudoknot
homologous
IL_4V88_413
NA
IL_5MEI_1801/6/557:559,
1/6/586:587
Single bulged U
geometric
IL_4V88_414
NA
IL_5MEI_1811/6/562:568,
1/6/575:583
Kink-turn related
homologous
IL_4V88_415
NA
IL_5MEI_1821/6/616:622,
1/6/1104:1105
No text annotation
homologous
IL_4V88_416
NA
IL_5MEI_1831/6/624:626,
1/6/973:975
Isolated non-canonical cWW pair
homologous
IL_4V88_417
NA
IL_5MEI_1841/6/627:631,
1/6/968:972
tSH-tHW-tHS
homologous
IL_4V88_418
NA
IL_5MEI_1851/6/646:648,
1/6/686:688
Isolated non-canonical cWW pair
homologous
IL_4V88_419
NA
IL_5MEI_1861/6/649:653,
1/6/677:685
No text annotation
homologous
IL_4V88_420
NA
IL_5MEI_1871/6/703:708,
1/6/730:735
Triple sheared related
homologous
IL_4V88_421
NA
IL_5MEI_1881/6/709:712,
1/6/726:729
Tandem non-canonical cWW pairs
geometric
IL_4EYA_003
IL_77658.1
IL_5MEI_1891/6/746:747,
1/6/802:805
Major groove minor groove platform; mini C-loop
homologous
IL_4V88_423
NA
IL_5MEI_1901/6/748:750,
1/6/799:801
Isolated non-canonical cWW pair
homologous
IL_4V88_424
NA
IL_5MEI_4841/6/751:759,
1/6/791:798
No text annotation
homologous
IL_8P9A_414
IL_59049.1
IL_5MEI_1921/6/819:822,
1/6/850:852
Isolated non-canonical cWW pair
homologous
IL_4V88_426
NA
IL_5MEI_1931/6/865:866,
1/6/962:965
Major groove platform; stack outside cWW
geometric
IL_4V88_428
NA
IL_5MEI_4851/6/868:869,
1/6/958:960
Single bulged U
geometric
IL_6UFH_004
IL_89505.4
IL_5MEI_1951/6/871:874,
1/6/953:956
Tandem non-canonical cWW pairs
homologous
IL_4V88_430
NA
IL_5MEI_1961/6/874:878,
1/6/950:953
Tandem non-canonical cWW pairs
geometric
IL_4V88_431
NA
IL_5MEI_1971/6/885:888,
1/6/924:927
Tandem non-canonical cWW pairs
homologous
IL_4V88_432
NA
IL_5MEI_1981/6/893:899,
1/6/910:919
Kink-turn related
homologous
IL_8C3A_440
NA
IL_5MEI_1991/6/985:990,
1/6/1014:1016
Other IL
geometric
IL_4V88_435
NA
IL_5MEI_2001/6/990:994,
1/6/1010:1014
tSH-tHW-tHS
homologous
IL_4V88_436
NA
IL_5MEI_2011/6/1034:1036,
1/6/1095:1101
No text annotation
homologous
IL_4V88_437
NA
IL_5MEI_2021/6/1041:1044,
1/6/1074:1077
Tandem non-canonical cWW pairs
homologous
IL_4V88_438
NA
IL_5MEI_2031/6/1051:1053,
1/6/1066:1067
Single bulged U
homologous
IL_4V88_439
NA
IL_5MEI_2041/6/1111:1118,
1/6/1129:1134
8x6 Sarcin-Ricin with inserted Y; G-bulge
homologous
IL_4V88_440
NA
IL_5MEI_2051/6/1146:1147,
1/6/1630:1632
Single bulged A
homologous
IL_4V88_441
NA
IL_5MEI_2061/6/1149:1151,
1/6/1627:1628
Single bulged G
homologous
IL_4V88_442
NA
IL_5MEI_2071/6/1157:1160,
1/6/1617:1621
C-loop
homologous
IL_4V88_443
NA
IL_5MEI_2081/6/1173:1175,
1/6/1464:1466
Isolated non-canonical cWW pair
homologous
IL_4V88_444
NA
IL_5MEI_2091/6/1178:1179,
1/6/1459:1461
Minor groove platform
homologous
IL_4V88_445
NA
IL_5MEI_2101/6/1213:1215,
1/6/1448:1450
Isolated non-canonical cWW pair
geometric
IL_4V88_446
NA
IL_5MEI_5101/6/1224:1233,
1/6/1252:1259
No text annotation
homologous
IL_8P9A_470
IL_28304.1
IL_5MEI_2111/6/1234:1236,
1/6/1249:1251
No text annotation
homologous
IL_4V88_448
NA
IL_5MEI_2121/6/1268:1270,
1/6/1440:1441
Single bulged U
homologous
IL_4V88_449
NA
IL_5MEI_2131/6/1272:1276,
1/6/1436:1438
Isolated cWS basepair
homologous
IL_4V88_450
NA
IL_5MEI_4871/6/1272:1278,
1/6/1430:1438
No text annotation
homologous
IL_8P9A_439
IL_86012.1
IL_5MEI_2141/6/1276:1278,
1/6/1430:1436
Minor groove platform with extra cWW
geometric
IL_4V88_451
NA
IL_5MEI_2151/6/1280:1281,
1/6/1426:1428
Single bulged A
homologous
IL_4V88_452
NA
IL_5MEI_2161/6/1290:1292,
1/6/1323:1325
Isolated cWH basepair
homologous
IL_4V88_453
NA
IL_5MEI_2171/6/1306:1308,
1/6/1317:1318
Minor groove platform
geometric
IL_4V88_454
NA
IL_5MEI_2181/6/1339:1342,
1/6/1383:1385
Isolated non-canonical cWW pair
homologous
IL_4V88_455
NA
IL_5MEI_5111/6/1345:1348,
1/6/1377:1380
No text annotation
homologous
IL_8P9A_445
IL_78800.1
IL_5MEI_2201/6/1352:1354,
1/6/1369:1373
Isolated non-canonical cWW pair
homologous
IL_4V88_457
NA
IL_5MEI_2211/6/1389:1391,
1/6/1407:1412
Major groove platform; stack outside cWW
homologous
IL_4V88_458
NA
IL_5MEI_2221/6/1480:1487,
1/6/1519:1527
No text annotation
homologous
IL_4V88_459
NA
IL_5MEI_2231/6/1488:1494,
1/6/1513:1518
180 degree turn
homologous
IL_4V88_460
NA
IL_5MEI_2241/6/1495:1498,
1/6/1509:1512
Tandem non-canonical cWW pairs
homologous
IL_4V88_461
NA
IL_5MEI_2251/6/1540:1545,
1/6/1566:1571
No text annotation
geometric
IL_4V88_462
NA
IL_5MEI_2261/6/1636:1638,
1/6/1764:1767
No text annotation
geometric
IL_4V88_463
NA
IL_5MEI_2271/6/1638:1641,
1/6/1760:1764
No text annotation
homologous
IL_4V88_464
NA
IL_5MEI_2281/6/1642:1644,
1/6/1757:1759
Isolated non-canonical cWW pair
geometric
IL_4V88_465
NA
IL_5MEI_2291/6/1644:1647,
1/6/1753:1757
Non canonical cWW and near pair
homologous
IL_4V88_466
NA
IL_5MEI_2301/6/1650:1652,
1/6/1748:1750
Isolated non-canonical cWW pair
homologous
IL_4V88_467
NA
IL_5MEI_2311/6/1653:1656,
1/6/1744:1747
Double sheared
homologous
IL_4V88_468
NA
IL_5MEI_2321/6/1656:1658,
1/6/1743:1744
Single bulged U
geometric
IL_4V88_469
NA
IL_5MEI_2331/6/1665:1667,
1/6/1734:1736
Isolated non-canonical cWW pair
homologous
IL_4V88_470
NA
IL_5MEI_2341/6/1669:1672,
1/6/1729:1732
Double sheared
homologous
IL_4V88_471
NA
IL_5MEI_2351/6/1672:1674,
1/6/1727:1729
Isolated non-canonical cWW pair
geometric
IL_4V88_472
NA
IL_5MEI_2361/6/1675:1678,
1/6/1723:1726
Tandem non-canonical cWW pairs
homologous
IL_4V88_473
NA
IL_5MEI_2371/6/1678:1682,
1/6/1719:1723
Triple sheared
geometric
IL_4V88_474
NA
IL_5MEI_2391/A/24:26,
1/A/600:601
Single bulged C
geometric
IL_4V88_384
NA
IL_5MEI_2401/A/35:37,
1/A/471:473
Isolated non-canonical cWW pair
geometric
IL_4V88_385
NA
IL_5MEI_2411/A/37:41,
1/A/466:471
Triple sheared related
geometric
IL_4V88_386
NA
IL_5MEI_2421/A/42:48,
1/A/431:433
No text annotation
geometric
IL_4V88_387
NA
IL_5MEI_2431/A/50:52,
1/A/428:429
Minor groove platform
geometric
IL_4V88_388
NA
IL_5MEI_2441/A/58:63,
1/A/87:89
No text annotation
geometric
IL_4V88_389
NA
IL_5MEI_2451/A/64:69,
1/A/82:86
No text annotation
geometric
IL_4V88_390
NA
IL_5MEI_2461/A/109:112,
1/A/302:305
Tandem non-canonical cWW pairs
geometric
IL_4V88_391
NA
IL_5MEI_2471/A/113:116,
1/A/300:301
Multiple bulged bases
geometric
IL_4V88_392
NA
IL_5MEI_2481/A/117:122,
1/A/295:299
No text annotation
geometric
IL_4V88_393
NA
IL_5MEI_2491/A/143:149,
1/A/165:172
tWH-tWH-tHW-tHW
geometric
IL_4V88_394
NA
IL_5MEI_2501/A/150:152,
1/A/162:164
Isolated cWH basepair
geometric
IL_6RA4_002
IL_10167.6
IL_5MEI_5121/A/186:189,
1/A/196:199
Double sheared
homologous
IL_8CRE_402
IL_09705.15
IL_5MEI_2521/A/204:206,
1/A/259:263
Major groove platform with extra cWW
geometric
IL_4V88_397
NA
IL_5MEI_2531/A/206:208,
1/A/257:259
Isolated non-canonical cWW pair
geometric
IL_4V88_398
NA
IL_5MEI_2541/A/265:267,
1/A/288:289
Single bulged A
geometric
IL_4V88_399
NA
IL_5MEI_2551/A/270:273,
1/A/283:285
No text annotation
geometric
IL_4V88_400
NA
IL_5MEI_2561/A/311:316,
1/A/348:355
Kink-turn with non-sequential stacking
geometric
IL_4V88_402
NA
IL_5MEI_2571/A/318:323,
1/A/345:346
No text annotation
geometric
IL_5Y58_001
IL_59877.1
IL_5MEI_2581/A/363:365,
1/A/376:381
No text annotation
geometric
IL_4V88_404
NA
IL_5MEI_2591/A/389:391,
1/A/406:408
Isolated cWH basepair
geometric
IL_4V88_405
NA
IL_5MEI_2601/A/411:413,
1/A/420:422
Isolated non-canonical cWW pair
geometric
IL_5H1K_001
NA
IL_5MEI_2611/A/439:441,
1/A/463:464
Single bulged U
geometric
IL_4V88_407
NA
IL_5MEI_5131/A/443:447,
1/A/460:461
C-loop
homologous
IL_8P9A_397
IL_03109.3
IL_5MEI_5141/A/447:448,
1/A/458:460
Single bulged G
homologous
IL_8P9A_398
IL_00225.14
IL_5MEI_2631/A/479:485,
1/A/502:509
No text annotation
IL_5MEI_5151/A/517:518,
1/A/533:535
Minor groove platform
homologous
IL_8CRE_419
IL_51454.3
IL_5MEI_5161/A/518:520,
1/A/532:533
Minor groove platform
homologous
IL_8P9A_401
IL_51454.3
IL_5MEI_2651/A/550:557,
1/A/587:588
SSU/LSU pseudoknot
geometric
IL_4V88_413
NA
IL_5MEI_2661/A/557:559,
1/A/586:587
Single bulged U
geometric
IL_4V88_407
NA
IL_5MEI_5171/A/562:568,
1/A/575:583
No text annotation
homologous
IL_8CRE_423
IL_54177.4
IL_5MEI_2681/A/616:622,
1/A/1104:1105
No text annotation
geometric
IL_4V88_416
NA
IL_5MEI_2691/A/624:626,
1/A/973:975
Isolated non-canonical cWW pair
geometric
IL_4V88_417
NA
IL_5MEI_2701/A/627:631,
1/A/968:972
tSH-tHW-tHS
geometric
IL_4V88_418
NA
IL_5MEI_2711/A/646:648,
1/A/686:688
Isolated non-canonical cWW pair
geometric
IL_4V88_419
NA
IL_5MEI_2721/A/652:658,
1/A/676:682
No text annotation
IL_5MEI_2731/A/746:747,
1/A/802:805
Major groove minor groove platform; mini C-loop
geometric
IL_4V88_423
NA
IL_5MEI_2741/A/748:750,
1/A/799:801
Isolated non-canonical cWW pair
geometric
IL_5J7L_326
IL_28037.2
IL_5MEI_5181/A/751:759,
1/A/791:798
No text annotation
homologous
IL_8P9A_414
IL_59049.1
IL_5MEI_2761/A/817:822,
1/A/850:854
Partly complementary
geometric
IL_7VYX_008
IL_49751.4
IL_5MEI_4901/A/817:824,
1/A/848:854
No text annotation
IL_5MEI_2771/A/865:866,
1/A/962:965
Major groove platform; stack outside cWW
geometric
IL_4V88_428
NA
IL_5MEI_4911/A/868:870,
1/A/957:960
Isolated non-canonical cWW pair
homologous
IL_8P9A_418
IL_57744.1
IL_5MEI_5191/A/871:873,
1/A/954:956
Isolated non-canonical cWW pair
geometric
IL_7QUA_003
IL_87907.2
IL_5MEI_2801/A/874:878,
1/A/950:953
Tandem non-canonical cWW pairs
geometric
IL_4V88_431
NA
IL_5MEI_2811/A/885:888,
1/A/924:927
Tandem non-canonical cWW pairs
geometric
IL_4V88_432
NA
IL_5MEI_2821/A/893:895,
1/A/917:919
Isolated non-canonical cWW pair
geometric
IL_4V88_433
NA
IL_5MEI_4921/A/893:899,
1/A/910:919
No text annotation
homologous
IL_8P9A_422
IL_57741.1
IL_5MEI_2831/A/895:899,
1/A/910:917
Kink-turn
geometric
IL_6UFM_001
IL_01488.3
IL_5MEI_2841/A/985:990,
1/A/1014:1016
Other IL
geometric
IL_4V88_435
NA
IL_5MEI_2851/A/990:994,
1/A/1010:1014
tSH-tHW-tHS
geometric
IL_4V88_436
NA
IL_5MEI_2861/A/1034:1036,
1/A/1095:1101
No text annotation
geometric
IL_4V88_437
NA
IL_5MEI_5201/A/1041:1044,
1/A/1074:1077
Tandem non-canonical cWW pairs
homologous
IL_8P9A_426
IL_85033.2
IL_5MEI_5211/A/1051:1053,
1/A/1066:1067
Single bulged U
homologous
IL_8P9A_427
IL_89505.4
IL_5MEI_2891/A/1111:1118,
1/A/1129:1134
8x6 Sarcin-Ricin with inserted Y; G-bulge
geometric
IL_4V88_440
NA
IL_5MEI_2901/A/1146:1147,
1/A/1630:1632
Single bulged A
geometric
IL_4V88_441
NA
IL_5MEI_2911/A/1149:1151,
1/A/1627:1628
Single bulged G
geometric
IL_4V88_442
NA
IL_5MEI_2921/A/1157:1160,
1/A/1617:1621
C-loop
geometric
IL_4V88_443
NA
IL_5MEI_2931/A/1173:1175,
1/A/1464:1466
Isolated non-canonical cWW pair
geometric
IL_4V88_444
NA
IL_5MEI_2941/A/1178:1179,
1/A/1459:1461
Minor groove platform
geometric
IL_4V88_445
NA
IL_5MEI_2951/A/1213:1215,
1/A/1448:1450
Isolated non-canonical cWW pair
geometric
IL_4V88_446
NA
IL_5MEI_5221/A/1224:1230,
1/A/1257:1259
No text annotation
IL_5MEI_5231/A/1224:1233,
1/A/1252:1259
No text annotation
homologous
IL_8P9A_470
IL_28304.1
IL_5MEI_2971/A/1230:1233,
1/A/1252:1257
No text annotation
IL_5MEI_2981/A/1234:1236,
1/A/1249:1251
No text annotation
geometric
IL_4V88_448
NA
IL_5MEI_2991/A/1268:1270,
1/A/1440:1441
Single bulged U
geometric
IL_4V88_449
NA
IL_5MEI_3001/A/1272:1276,
1/A/1436:1438
Isolated cWS basepair
geometric
IL_4V88_450
NA
IL_5MEI_4961/A/1272:1278,
1/A/1430:1438
No text annotation
homologous
IL_8P9A_439
IL_86012.1
IL_5MEI_3011/A/1276:1278,
1/A/1430:1436
Minor groove platform with extra cWW
geometric
IL_4V88_451
NA
IL_5MEI_3021/A/1280:1281,
1/A/1426:1428
Single bulged A
geometric
IL_4V88_452
NA
IL_5MEI_3031/A/1290:1292,
1/A/1323:1325
Isolated non-canonical cWW pair
geometric
IL_5TBW_042
NA
IL_5MEI_3041/A/1306:1308,
1/A/1317:1318
Minor groove platform
geometric
IL_5TBW_039
NA
IL_5MEI_3051/A/1339:1342,
1/A/1383:1385
Isolated non-canonical cWW pair
geometric
IL_4V88_455
NA
IL_5MEI_5241/A/1345:1348,
1/A/1377:1380
No text annotation
homologous
IL_8P9A_445
IL_78800.1
IL_5MEI_3071/A/1352:1354,
1/A/1369:1373
Isolated non-canonical cWW pair
geometric
IL_4V88_457
NA
IL_5MEI_3081/A/1389:1391,
1/A/1407:1412
Major groove platform; stack outside cWW
geometric
IL_4V88_458
NA
IL_5MEI_3091/A/1480:1487,
1/A/1519:1527
No text annotation
geometric
IL_4V88_459
NA
IL_5MEI_3101/A/1488:1494,
1/A/1513:1518
180 degree turn
geometric
IL_4V88_460
NA
IL_5MEI_3111/A/1495:1498,
1/A/1509:1512
Tandem non-canonical cWW pairs
geometric
IL_4V88_461
NA
IL_5MEI_3121/A/1540:1545,
1/A/1566:1571
No text annotation
geometric
IL_4V88_462
NA
IL_5MEI_3131/A/1636:1638,
1/A/1764:1767
No text annotation
geometric
IL_4V88_463
NA
IL_5MEI_3141/A/1638:1641,
1/A/1760:1764
No text annotation
geometric
IL_4V88_464
NA
IL_5MEI_3151/A/1642:1644,
1/A/1757:1759
Isolated non-canonical cWW pair
geometric
IL_4V88_465
NA
IL_5MEI_3161/A/1644:1647,
1/A/1753:1757
Non canonical cWW and near pair
geometric
IL_4V88_466
NA
IL_5MEI_3171/A/1650:1652,
1/A/1748:1750
Isolated non-canonical cWW pair
geometric
IL_5ED1_002
IL_87907.2
IL_5MEI_3181/A/1653:1656,
1/A/1744:1747
Double sheared
geometric
IL_4V88_468
NA
IL_5MEI_3191/A/1656:1658,
1/A/1743:1744
Single bulged U
geometric
IL_6CZR_156
NA
IL_5MEI_3201/A/1665:1667,
1/A/1734:1736
Isolated non-canonical cWW pair
geometric
IL_4V88_470
NA
IL_5MEI_3211/A/1669:1672,
1/A/1729:1732
Double sheared
geometric
IL_4V88_471
NA
IL_5MEI_3221/A/1672:1674,
1/A/1727:1729
Isolated non-canonical cWW pair
geometric
IL_4V88_472
NA
IL_5MEI_3231/A/1675:1678,
1/A/1723:1726
Tandem non-canonical cWW pairs
geometric
IL_4V88_473
NA
IL_5MEI_3241/A/1678:1682,
1/A/1719:1723
Triple sheared
geometric
IL_4V88_474
NA
IL_5MEI_4971/A/1678:1685,
1/A/1716:1723
No text annotation
IL_5MEI_3251/A/1682:1684,
1/A/1718:1719
Single stack bend
geometric
IL_5J7L_032
IL_26793.1
IL_5MEI_3261/A/1684:1685,
1/A/1716:1718
Single stack bend
geometric
IL_4V83_236
IL_90729.1
IL_5MEI_3281/AR/7:8,
1/AT/150:152
Single bulged C
homologous
IL_5TBW_002
NA
IL_5MEI_3291/AR/13:15,
1/AT/144:145
Single bulged U
homologous
IL_8C3A_003
NA
IL_5MEI_3301/AR/27:28,
1/AR/56:58
Single stack bend
homologous
IL_5TBW_004
NA
IL_5MEI_3311/AR/31:38,
1/AR/45:53
tSH-tHW-tHH-tHS
geometric
IL_5TBW_005
NA
IL_5MEI_3321/AR/82:89,
1/AR/97:103
8x7 Sarcin-Ricin; G-bulge
homologous
IL_5TBW_006
NA
IL_5MEI_3331/AR/123:124,
1/AR/144:149
No text annotation
geometric
IL_5TBW_007
NA
IL_5MEI_3341/AR/125:127,
1/AR/141:143
Isolated non-canonical cWW pair
homologous
IL_8C3A_008
NA
IL_5MEI_3351/AR/163:165,
1/AR/257:258
Single stack bend
homologous
IL_5TBW_009
NA
IL_5MEI_5251/AR/169:173,
1/AR/245:253
No text annotation
homologous
IL_8P9A_239
IL_13358.1
IL_5MEI_5261/AR/175:178,
1/AR/238:243
No text annotation
homologous
IL_8P9A_467
IL_07469.2
IL_5MEI_3381/AR/189:191,
1/AR/204:205
Single bulged U
homologous
IL_5TBW_012
NA
IL_5MEI_3391/AR/337:339,
1/AT/25:26
Single bulged A
homologous
IL_5TBW_013
NA
IL_5MEI_3401/AR/376:379,
1/AR/390:403
No text annotation
geometric
IL_5TBW_014
NA
IL_5MEI_5271/AR/404:410,
1/AT/13:19
No text annotation
homologous
IL_8P9A_244
IL_04021.2
IL_5MEI_3421/AR/429:431,
1/AR/628:630
Isolated non-canonical cWW pair
homologous
IL_5TBW_016
NA
IL_5MEI_3441/AR/512:513,
1/AR/577:579
Single bulged A
homologous
IL_5TBW_018
NA
IL_5MEI_3451/AR/517:525,
1/AR/567:573
No text annotation
homologous
IL_5TBW_019
NA
IL_5MEI_3461/AR/531:538,
1/AR/553:561
No text annotation
homologous
IL_5TBW_020
NA
IL_5MEI_3471/AR/668:670,
1/AR/792:794
Isolated non-canonical cWW pair
homologous
IL_5TBW_021
NA
IL_5MEI_3481/AR/680:684,
1/AR/696:700
No text annotation
homologous
IL_5TBW_022
NA
IL_5MEI_3491/AR/725:728,
1/AR/741:745
UAA/GAN variation
homologous
IL_5TBW_023
NA
IL_5MEI_3501/AR/752:753,
1/AR/779:781
Single bulged A
homologous
IL_5TBW_024
NA
IL_5MEI_3511/AR/755:756,
1/AR/775:777
Single bulged U
homologous
IL_5TBW_025
NA
IL_5MEI_3521/AR/758:763,
1/AR/768:773
No text annotation
homologous
IL_5TBW_026
NA
IL_5MEI_3531/AR/803:805,
1/AR/938:940
Isolated non-canonical cWW pair
homologous
IL_5TBW_027
NA
IL_5MEI_3541/AR/805:809,
1/AR/931:938
tHW-tHW cross-strand stack
geometric
IL_5TBW_028
NA
IL_5MEI_3551/AR/833:834,
1/AR/859:861
Single bulged G
geometric
IL_5TBW_029
NA
IL_5MEI_3561/AR/834:838,
1/AR/855:859
Triple sheared
homologous
IL_5TBW_030
NA
IL_5MEI_3571/AR/869:872,
1/AR/888:890
Major groove platform with extra cWW
homologous
IL_5TBW_031
NA
IL_5MEI_3581/AR/873:875,
1/AR/886:887
Single bulged U
homologous
IL_8C3A_035
NA
IL_5MEI_3591/AR/907:909,
1/AR/919:923
Multiple bulged bases
geometric
IL_5TBW_033
NA
IL_5MEI_3601/AR/954:956,
1/AR/965:967
Isolated non-canonical cWW pair
homologous
IL_8C3A_037
NA
IL_5MEI_3611/AR/969:970,
1/AR/1111:1113
Single stack bend
homologous
IL_5TBW_035
NA
IL_5MEI_3621/AR/977:981,
1/AR/1102:1104
180 degree turn
homologous
IL_5TBW_036
NA
IL_5MEI_3631/AR/983:985,
1/AR/1099:1100
Single bulged G
homologous
IL_5TBW_037
NA
IL_5MEI_3641/AR/991:997,
1/AR/1052:1058
7x7 Sarcin-Ricin with intercalated A; G-bulge
homologous
IL_5TBW_038
NA
IL_5MEI_3651/AR/997:998,
1/AR/1050:1052
Minor groove platform
geometric
IL_5TBW_039
NA
IL_5MEI_3661/AR/999:1004,
1/AR/1046:1049
C-loop
homologous
IL_5TBW_040
NA
IL_5MEI_3671/AR/1006:1009,
1/AR/1041:1044
Tandem non-canonical cWW pairs
geometric
IL_5TBW_041
NA
IL_5MEI_3681/AR/1009:1011,
1/AR/1039:1041
Isolated non-canonical cWW pair
homologous
IL_5TBW_042
NA
IL_5MEI_3691/AR/1013:1018,
1/AR/1034:1037
Other IL
homologous
IL_5TBW_043
NA
IL_5MEI_4981/AR/1013:1021,
1/AR/1031:1037
No text annotation
IL_5MEI_3701/AR/1069:1071,
1/AR/1087:1089
Isolated non-canonical cWW pair
homologous
IL_8C3A_047
NA
IL_5MEI_3711/AR/1074:1076,
1/AR/1083:1084
Single bulged A
geometric
IL_5TBW_045
NA
IL_5MEI_3721/AR/1120:1122,
1/AR/1136:1138
Isolated non-canonical cWW pair
homologous
IL_5TBW_046
NA
IL_5MEI_3741/AR/1167:1171,
1/AR/1328:1332
UAA/GAN
homologous
IL_5TBW_048
NA
IL_5MEI_3751/AR/1173:1180,
1/AR/1325:1326
SSU/LSU pseudoknot
homologous
IL_5TBW_049
NA
IL_5MEI_3761/AR/1180:1182,
1/AR/1324:1325
Single bulged U
geometric
IL_5TBW_050
NA
IL_5MEI_3771/AR/1187:1194,
1/AR/1314:1319
No text annotation
homologous
IL_5TBW_051
NA
IL_5MEI_3781/AR/1194:1205,
1/AR/1299:1314
No text annotation
geometric
IL_5TBW_052
NA
IL_5MEI_3791/AR/1207:1209,
1/AR/1296:1297
Single bulged U
homologous
IL_5TBW_053
NA
IL_5MEI_3801/AR/1218:1226,
1/AR/1283:1287
Kink-turn
homologous
IL_8C3A_057
NA
IL_5MEI_3811/AR/1234:1238,
1/AR/1250:1254
No text annotation
geometric
IL_4V9F_043
NA
IL_5MEI_3821/AR/1262:1266,
1/AR/1275:1277
Major groove platform with extra cWW
geometric
IL_1MMS_002
IL_51387.3
IL_5MEI_3831/AR/1376:1378,
1/AR/1428:1431
Isolated cWS basepair
homologous
IL_5TBW_057
NA
IL_5MEI_3841/AR/1385:1387,
1/AR/1420:1421
Single bulged A
homologous
IL_5TBW_058
NA
IL_5MEI_3851/AR/1388:1395,
1/AR/1415:1419
Kink-turn
homologous
IL_5TBW_059
NA
IL_5MEI_3861/AR/1398:1400,
1/AR/1411:1412
Single bulged A
homologous
IL_5TBW_060
NA
IL_5MEI_3871/AR/1444:1450,
1/AR/2354:2359
7x6 Sarcin-Ricin; G-bulge
homologous
IL_5TBW_061
NA
IL_5MEI_4991/AR/1501:1505,
1/AR/1513:1515
C-loop
homologous
IL_8P9A_290
IL_63596.11
IL_5MEI_3891/AR/1532:1536,
1/AR/1585:1590
UAA/GAN
homologous
IL_5TBW_063
NA
IL_5MEI_3901/AR/1618:1621,
1/AR/1824:1826
Other IL
homologous
IL_5TBW_064
NA
IL_5MEI_5001/AR/1623:1624,
1/AR/1819:1822
Major groove platform related
homologous
IL_8P9A_293
IL_48076.6
IL_5MEI_3921/AR/1627:1631,
1/AR/1811:1816
No text annotation
homologous
IL_5TBW_066
NA
IL_5MEI_3931/AR/1645:1649,
1/AR/1806:1810
Triple sheared
homologous
IL_5TBW_067
NA
IL_5MEI_3941/AR/1661:1663,
1/AR/1786:1788
Isolated non-canonical cWW pair
homologous
IL_5TBW_068
NA
IL_5MEI_3951/AR/1669:1670,
1/AR/1778:1780
Single bulged C
geometric
IL_5TBW_069
NA
IL_5MEI_3961/AR/1670:1671,
1/AR/1776:1778
Single stack bend
homologous
IL_5TBW_070
NA
IL_5MEI_3971/AR/1694:1698,
1/AR/1747:1752
No text annotation
homologous
IL_8C3A_077
NA
IL_5MEI_3981/AR/1702:1707,
1/AR/1737:1743
No text annotation
homologous
IL_5TBW_072
NA
IL_5MEI_3991/AR/1711:1717,
1/AR/1727:1733
Kink-turn
homologous
IL_5TBW_073
NA
IL_5MEI_5281/AR/1883:1889,
1/AR/2346:2349
No text annotation
homologous
IL_8P9A_302
IL_22829.2
IL_5MEI_4011/AR/1895:1897,
1/AR/2338:2340
Isolated tWW turn
homologous
IL_5TBW_075
NA
IL_5MEI_4021/AR/1898:1901,
1/AR/2336:2337
Major groove platform; stack outside cWW
geometric
IL_5TBW_076
NA
IL_5MEI_5011/AR/1898:1906,
1/AR/2333:2337
No text annotation
homologous
IL_8P9A_305
IL_22854.4
IL_5MEI_4031/AR/1901:1906,
1/AR/2333:2336
Intercalated tWH
homologous
IL_5TBW_077
NA
IL_5MEI_4041/AR/1918:1923,
1/AR/1928:1934
tSH-tSH-tHH-tHS
homologous
IL_5TBW_078
NA
IL_5MEI_4051/AR/1940:1942,
1/AR/2106:2108
Isolated non-canonical cWW pair
homologous
IL_5TBW_079
NA
IL_5MEI_4061/AR/1947:1948,
1/AR/2098:2101
No text annotation
homologous
IL_5TBW_080
NA
IL_5MEI_4071/AR/1951:1953,
1/AR/2094:2095
Single stack bend
homologous
IL_5TBW_081
NA
IL_5MEI_4081/AR/2128:2129,
1/AR/2323:2325
Single bulged A
homologous
IL_8C3A_087
NA
IL_5MEI_4091/AR/2156:2161,
1/AR/2173:2180
Kink-turn related
homologous
IL_5TBW_083
NA
IL_5MEI_4101/AR/2196:2199,
1/AR/2245:2246
Major groove intercalation
homologous
IL_5TBW_084
NA
IL_5MEI_4111/AR/2200:2201,
1/AR/2241:2244
Multiple bulged bases
homologous
IL_8C3A_090
NA
IL_5MEI_4121/AR/2204:2206,
1/AR/2237:2238
Single bulged U
homologous
IL_5TBW_086
NA
IL_5MEI_4131/AR/2206:2210,
1/AR/2235:2237
Major groove platform with extra pair
geometric
IL_5TBW_087
NA
IL_5MEI_4141/AR/2211:2217,
1/AR/2228:2234
No text annotation
homologous
IL_5TBW_088
NA
IL_5MEI_4151/AR/2276:2277,
1/AR/2307:2310
No text annotation
homologous
IL_8C3A_094
NA
IL_5MEI_4161/AR/2277:2288,
1/AR/2304:2307
No text annotation
geometric
IL_5TBW_090
NA
IL_5MEI_4171/AR/2391:2394,
1/AR/2986:2988
Major groove platform with extra pair
homologous
IL_5TBW_091
NA
IL_5MEI_4181/AR/2396:2398,
1/AR/2981:2984
Major groove platform with intercalation
homologous
IL_5TBW_092
NA
IL_5MEI_4191/AR/2409:2411,
1/AR/2811:2812
Single bulged U
homologous
IL_5TBW_093
NA
IL_5MEI_4201/AR/2412:2413,
1/AR/2807:2810
Minor groove platform
homologous
IL_5TBW_094
NA
IL_5MEI_4211/AR/2423:2425,
1/AR/2604:2607
Isolated tHS basepair with bulges
homologous
IL_5TBW_095
NA
IL_5MEI_4221/AR/2520:2526,
1/AR/2584:2587
No text annotation
homologous
IL_5TBW_096
NA
IL_5MEI_5021/AR/2529:2563,
1/AR/2578:2581
No text annotation
IL_5MEI_4231/AR/2614:2615,
1/AR/2625:2627
Single bulged A
homologous
IL_8C3A_107
NA
IL_5MEI_4241/AR/2666:2668,
1/AR/2686:2690
Isolated tHS basepair with bulges
geometric
IL_5TBW_099
NA
IL_5MEI_4251/AR/2718:2721,
1/AR/2735:2738
Tandem non-canonical cWW pairs
homologous
IL_5TBW_100
NA
IL_5MEI_4261/AR/2770:2773,
1/AR/2787:2788
Single stack bend
homologous
IL_5TBW_101
NA
IL_5MEI_4271/AR/2823:2824,
1/AR/2865:2867
Major groove platform
homologous
IL_5TBW_102
NA
IL_5MEI_5031/AR/2823:2826,
1/AR/2863:2867
No text annotation
homologous
IL_8C3A_111
NA
IL_5MEI_4281/AR/2824:2826,
1/AR/2863:2865
Isolated non-canonical cWW pair
geometric
IL_5TBW_103
NA
IL_5MEI_4291/AR/2826:2828,
1/AR/2862:2863
Major groove platform
geometric
IL_5TBW_104
NA
IL_5MEI_4301/AR/2828:2830,
1/AR/2858:2862
Major groove minor groove platform with extra cWW
homologous
IL_5TBW_105
NA
IL_5MEI_4311/AR/2835:2839,
1/AR/2849:2853
Triple sheared
homologous
IL_5TBW_106
NA
IL_5MEI_4321/AR/2876:2877,
1/AR/2949:2951
Major groove platform
homologous
IL_8C3A_115
NA
IL_5MEI_4331/AR/2879:2881,
1/AR/2943:2947
Isolated non-canonical cWW with bulges
geometric
IL_5TBW_108
NA
IL_5MEI_4341/AR/2881:2882,
1/AR/2940:2943
Multiple bulged bases
homologous
IL_5TBW_109
NA
IL_5MEI_4351/AR/2889:2891,
1/AR/2912:2914
Isolated non-canonical cWW pair
geometric
IL_5TBW_110
NA
IL_5MEI_4361/AR/2891:2892,
1/AR/2909:2912
Major groove platform with intercalation
homologous
IL_5TBW_111
NA
IL_5MEI_4371/AR/2918:2920,
1/AR/2926:2928
Isolated non-canonical cWW pair
homologous
IL_5TBW_112
NA
IL_5MEI_4381/AR/2960:2961,
1/AR/2970:2972
Single bulged A
homologous
IL_5TBW_113
NA
IL_5MEI_4391/AR/3004:3007,
1/AR/3139:3144
Double sheared
homologous
IL_5TBW_114
NA
IL_5MEI_4401/AR/3012:3014,
1/AR/3040:3042
Isolated non-canonical cWW pair
homologous
IL_8C3A_124
NA
IL_5MEI_4411/AR/3018:3025,
1/AR/3030:3036
8x7 Sarcin-Ricin; G-bulge
homologous
IL_5TBW_116
NA
IL_5MEI_4421/AR/3047:3051,
1/AR/3091:3094
Major groove minor groove platform with tHH
homologous
IL_5TBW_117
NA
IL_5MEI_4431/AR/3054:3059,
1/AR/3084:3088
UAA/GAN related
homologous
IL_5TBW_118
NA
IL_5MEI_4441/AR/3063:3064,
1/AR/3077:3080
Multiple bulged bases
homologous
IL_5TBW_119
NA
IL_5MEI_4451/AR/3103:3107,
1/AR/3127:3131
UAA/GAN
homologous
IL_5TBW_120
NA
IL_5MEI_5291/AR/3163:3166,
1/AR/3284:3287
Tandem non-canonical cWW pairs
geometric
IL_1MFQ_004
IL_85033.2
IL_5MEI_4471/AR/3168:3170,
1/AR/3280:3282
Isolated non-canonical cWW pair
homologous
IL_5TBW_122
NA
IL_5MEI_4481/AR/3177:3179,
1/AR/3210:3211
Single bulged A
geometric
IL_5TBW_123
NA
IL_5MEI_4491/AR/3179:3188,
1/AR/3204:3210
No text annotation
homologous
IL_5TBW_124
NA
IL_5MEI_4501/AR/3193:3194,
1/AR/3197:3199
Single bulged U
geometric
IL_5TBW_125
NA
IL_5MEI_4511/AR/3225:3229,
1/AR/3258:3260
No text annotation
homologous
IL_8C3A_133
NA
IL_5MEI_4521/AR/3233:3235,
1/AR/3252:3254
Isolated non-canonical cWW pair
homologous
IL_5TBW_127
NA
IL_5MEI_4531/AR/3235:3238,
1/AR/3249:3252
Tandem non-canonical cWW pairs
geometric
IL_6MWN_005
IL_77658.1
IL_5MEI_4541/AR/3300:3303,
1/AR/3311:3314
Tandem non-canonical cWW pairs
geometric
IL_5TBW_129
NA
IL_5MEI_4551/AR/3318:3320,
1/AR/3387:3388
Single bulged U
geometric
IL_5TBW_130
NA
IL_5MEI_4561/AR/3324:3325,
1/AR/3381:3383
Single bulged U
homologous
IL_5TBW_131
NA
IL_5MEI_4571/AR/3328:3330,
1/AR/3373:3378
Isolated non-canonical cWW pair
homologous
IL_5TBW_132
NA
IL_5MEI_4581/AR/3332:3337,
1/AR/3367:3371
No text annotation
homologous
IL_5TBW_133
NA
IL_5MEI_4591/AR/3340:3342,
1/AR/3363:3364
Single bulged U
geometric
IL_3WBM_001
IL_89505.4
IL_5MEI_4601/AR/3342:3345,
1/AR/3360:3363
Double sheared; A in syn
homologous
IL_8C3A_141
NA
IL_5MEI_5041/AR/3345:3350,
1/AR/3353:3360
No text annotation
geometric
IL_5TBW_476
NA
IL_5MEI_4611/AR/3348:3350,
1/AR/3353:3357
Isolated non-canonical cWW pair
geometric
IL_7A0S_026
IL_87907.2
IL_5MEI_4621/AS/15:16,
1/AS/63:65
Single bulged A
geometric
IL_5TBW_372
NA
IL_5MEI_4631/AS/21:27,
1/AS/53:58
Minor groove platform related
geometric
IL_5TBW_373
NA
IL_5MEI_4641/AS/28:29,
1/AS/49:52
Minor groove platform
geometric
IL_5TBW_374
NA
IL_5MEI_4651/AS/29:30,
1/AS/47:49
Single stack bend
geometric
IL_5TBW_375
NA
IL_5MEI_4661/AS/32:36,
1/AS/41:45
Symmetric double minor groove platform
geometric
IL_5TBW_376
NA
IL_5MEI_4671/AS/72:80,
1/AS/100:106
8x7 Sarcin-Ricin; G-bulge
geometric
IL_5TBW_377
NA
IL_5MEI_4681/AS/84:87,
1/AS/94:96
Isolated non-canonical cWW pair
geometric
IL_5TBW_378
NA
IL_5MEI_4691/AT/44:64,
1/AT/96:100
No text annotation
geometric
IL_5TBW_144
NA
IL_5MEI_5301/AT/64:66,
1/AT/93:96
Isolated non-canonical cWW with bulges
homologous
IL_8P9A_371
IL_07785.1
IL_5MEI_4711/AT/68:69,
1/AT/89:91
Single bulged U
geometric
IL_5TBW_146
NA

Problematic loops

#loop idProblemSequence
IL_5MEI_001No text annotation
IL_5MEI_011Major groove platform with extra pair
IL_5MEI_017Kink-turn related
IL_5MEI_043Other IL
IL_5MEI_047Isolated cWS basepair
IL_5MEI_062No text annotation
IL_5MEI_065Multiple bulged bases with near cWW
IL_5MEI_073No text annotation
IL_5MEI_474No text annotation
IL_5MEI_475No text annotation
IL_5MEI_478No text annotation
IL_5MEI_121No text annotation
IL_5MEI_136Isolated non-canonical cWW pair
IL_5MEI_155No text annotation
IL_5MEI_481Double sheared with near cWW
IL_5MEI_161Double sheared
IL_5MEI_176Other IL
IL_5MEI_177Minor groove platform with extra cWW
IL_5MEI_191No text annotation
IL_5MEI_194Tandem non-canonical cWW pairs
IL_5MEI_486No text annotation
IL_5MEI_488No text annotation
IL_5MEI_219No text annotation
IL_5MEI_489Isolated tWW contact
IL_5MEI_238No text annotation
IL_5MEI_251No text annotation
IL_5MEI_262C-loop with extra cWW pair
IL_5MEI_264Double sheared
IL_5MEI_267No text annotation
IL_5MEI_275No text annotation
IL_5MEI_278Tandem non-canonical cWW pairs
IL_5MEI_279Tandem non-canonical cWW pairs
IL_5MEI_287No text annotation
IL_5MEI_288Isolated non-canonical cWW pair
IL_5MEI_493Tandem non-canonical cWW pairs
IL_5MEI_296No text annotation
IL_5MEI_494No text annotation
IL_5MEI_495No text annotation
IL_5MEI_306No text annotation
IL_5MEI_327No text annotation
IL_5MEI_336No text annotation
IL_5MEI_337No text annotation
IL_5MEI_341No text annotation
IL_5MEI_343Kink-turn related
IL_5MEI_373Isolated cWS basepair
IL_5MEI_388No text annotation
IL_5MEI_391Isolated non-canonical cWW with bulges
IL_5MEI_400No text annotation
IL_5MEI_446No text annotation
IL_5MEI_470No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_5MEI_0011/1/113:123,
1/1/149:158,
1/1/263:267
No text annotation
homologous
J3_8C3A_001
NA
J3_5MEI_0591/1/113:124,
1/1/144:158,
1/1/263:267
No text annotation
J3_5MEI_0601/1/185:189,
1/1/205:214,
1/1/226:231
No text annotation
homologous
J3_8P9A_044
J3_75408.1
J3_5MEI_0611/1/340:356,
1/1/363:368,
1/4/21:24
No text annotation
homologous
J3_8P9A_045
J3_30040.2
J3_5MEI_0021/1/369:376,
1/1/403:404,
1/4/19:20
No text annotation
homologous
J3_5TBW_002
NA
J3_5MEI_0621/1/369:379,
1/1/390:404,
1/4/19:20
No text annotation
homologous
J3_8P9A_047
J3_92134.2
J3_5MEI_0031/1/502:503,
1/1/588:597,
1/1/606:611
No text annotation
homologous
J3_5TBW_003
NA
J3_5MEI_0041/1/814:820,
1/1/905:907,
1/1/923:926
No text annotation
homologous
J3_5TBW_004
NA
J3_5MEI_0051/1/828:831,
1/1/863:867,
1/1/892:897
No text annotation
homologous
J3_5TBW_005
NA
J3_5MEI_0061/1/986:987,
1/1/1062:1066,
1/1/1092:1098
No text annotation
homologous
J3_5TBW_006
NA
J3_5MEI_0071/1/1230:1232,
1/1/1256:1262,
1/1/1277:1279
No text annotation
homologous
J3_8C3A_005
NA
J3_5MEI_0891/1/1230:1238,
1/1/1250:1262,
1/1/1277:1279
No text annotation
J3_5MEI_0081/1/1479:1485,
1/1/1857:1859,
1/1/1871:1874
No text annotation
homologous
J3_5TBW_008
NA
J3_5MEI_0091/1/1488:1491,
1/1/1837:1843,
1/1/1852:1854
No text annotation
homologous
J3_5TBW_009
NA
J3_5MEI_0101/1/1526:1531,
1/1/1591:1595,
1/1/1612:1613
No text annotation
homologous
J3_5TBW_010
NA
J3_5MEI_0901/1/1537:1542,
1/1/1551:1566,
1/1/1572:1584
No text annotation
J3_5MEI_0111/1/1631:1632,
1/1/1641:1645,
1/1/1810:1811
No text annotation
homologous
J3_8C3A_054
NA
J3_5MEI_0651/1/1654:1658,
1/1/1791:1792,
1/1/1796:1801
No text annotation
homologous
J3_8P9A_058
J3_12393.2
J3_5MEI_0121/1/2432:2435,
1/1/2512:2517,
1/1/2590:2597
No text annotation
homologous
J3_5TBW_012
NA
J3_5MEI_0661/1/2651:2653,
1/1/2754:2765,
1/1/2793:2798
No text annotation
homologous
J3_8P9A_061
J3_20992.1
J3_5MEI_0131/1/2664:2666,
1/1/2690:2692,
1/1/2701:2706
No text annotation
homologous
J3_5TBW_013
NA
J3_5MEI_0141/1/2886:2889,
1/1/2914:2916,
1/1/2930:2936
No text annotation
homologous
J3_5TBW_014
NA
J3_5MEI_0671/1/3171:3176,
1/1/3212:3220,
1/1/3265:3279
No text annotation
homologous
J3_8P9A_064
J3_03190.1
J3_5MEI_0151/1/3298:3300,
1/1/3314:3318,
1/1/3388:3390
No text annotation
homologous
J3_5TBW_015
NA
J3_5MEI_0681/1/3298:3300,
1/1/3314:3320,
1/1/3387:3390
No text annotation
geometric
J3_5TBW_069
NA
J3_5MEI_0161/3/9:14,
1/3/66:67,
1/3/111:112
No text annotation
homologous
J3_5TBW_045
NA
J3_5MEI_0691/4/44:45,
1/4/58:64,
1/4/96:100
No text annotation
homologous
J3_8P4V_024
NA
J3_5MEI_0171/6/41:42,
1/6/433:439,
1/6/464:466
No text annotation
geometric
J3_4V88_078
NA
J3_5MEI_0701/6/41:48,
1/6/431:439,
1/6/464:466
No text annotation
homologous
J3_8P9A_069
J3_46317.4
J3_5MEI_0181/6/633:635,
1/6/861:865,
1/6/965:966
No text annotation
geometric
J3_4V88_080
NA
J3_5MEI_0711/6/633:635,
1/6/861:866,
1/6/962:966
No text annotation
homologous
J3_8P9A_072
J3_17385.4
J3_5MEI_0191/6/760:763,
1/6/773:775,
1/6/785:790
No text annotation
homologous
J3_4V88_032
NA
J3_5MEI_0201/6/881:884,
1/6/928:936,
1/6/943:947
No text annotation
homologous
J3_4V88_033
NA
J3_5MEI_0211/6/1037:1039,
1/6/1079:1083,
1/6/1090:1094
No text annotation
homologous
J3_4V88_034
NA
J3_5MEI_0221/6/1161:1164,
1/6/1581:1587,
1/6/1609:1616
No text annotation
homologous
J3_4V88_035
NA
J3_5MEI_0231/6/1168:1171,
1/6/1468:1470,
1/6/1574:1577
No text annotation
homologous
J3_4V88_036
NA
J3_5MEI_0241/6/1180:1187,
1/6/1198:1209,
1/6/1454:1458
No text annotation
geometric
J3_4V88_037
NA
J3_5MEI_0251/6/1215:1220,
1/6/1263:1267,
1/6/1442:1448
No text annotation
homologous
J3_4V88_038
NA
J3_5MEI_0261/6/1283:1288,
1/6/1327:1332,
1/6/1419:1424
No text annotation
homologous
J3_4V88_039
NA
J3_5MEI_0271/6/1293:1294,
1/6/1303:1306,
1/6/1318:1322
No text annotation
homologous
J3_8P9A_081
J3_76043.3
J3_5MEI_0281/6/1336:1338,
1/6/1386:1389,
1/6/1412:1415
No text annotation
homologous
J3_4V88_040
NA
J3_5MEI_0731/6/1336:1338,
1/6/1386:1391,
1/6/1407:1415
No text annotation
homologous
J3_8P9A_083
J3_88233.1
J3_5MEI_0291/6/1470:1474,
1/6/1533:1540,
1/6/1571:1574
No text annotation
homologous
J3_4V88_041
NA
J3_5MEI_0301/A/41:42,
1/A/433:439,
1/A/464:466
No text annotation
geometric
J3_4V88_078
NA
J3_5MEI_0741/A/41:48,
1/A/431:439,
1/A/464:466
No text annotation
homologous
J3_8P9A_069
J3_46317.4
J3_5MEI_0751/A/213:228,
1/A/237:243,
1/A/250:252
No text annotation
J3_5MEI_0311/A/633:635,
1/A/861:865,
1/A/965:966
No text annotation
geometric
J3_4V88_080
NA
J3_5MEI_0761/A/633:635,
1/A/861:866,
1/A/962:966
No text annotation
homologous
J3_8P9A_072
J3_17385.4
J3_5MEI_0321/A/760:763,
1/A/773:775,
1/A/785:790
No text annotation
homologous
J3_8C3A_035
NA
J3_5MEI_0331/A/881:884,
1/A/928:936,
1/A/943:947
No text annotation
geometric
J3_4V88_033
NA
J3_5MEI_0341/A/1037:1039,
1/A/1079:1083,
1/A/1090:1094
No text annotation
homologous
J3_8C3A_037
NA
J3_5MEI_0351/A/1161:1164,
1/A/1581:1587,
1/A/1609:1616
No text annotation
homologous
J3_8C3A_038
NA
J3_5MEI_0361/A/1168:1171,
1/A/1468:1470,
1/A/1574:1577
No text annotation
homologous
J3_8C3A_039
NA
J3_5MEI_0371/A/1180:1187,
1/A/1198:1209,
1/A/1454:1458
No text annotation
homologous
J3_8C3A_040
NA
J3_5MEI_0381/A/1215:1220,
1/A/1263:1267,
1/A/1442:1448
No text annotation
homologous
J3_8C3A_041
NA
J3_5MEI_0391/A/1283:1288,
1/A/1327:1332,
1/A/1419:1424
No text annotation
homologous
J3_8P9A_080
J3_99563.1
J3_5MEI_0401/A/1293:1294,
1/A/1303:1306,
1/A/1318:1322
No text annotation
homologous
J3_8C3A_085
NA
J3_5MEI_0411/A/1336:1338,
1/A/1386:1389,
1/A/1412:1415
No text annotation
homologous
J3_8C3A_043
NA
J3_5MEI_0781/A/1336:1338,
1/A/1386:1391,
1/A/1407:1415
No text annotation
homologous
J3_8P9A_083
J3_88233.1
J3_5MEI_0421/A/1470:1474,
1/A/1533:1540,
1/A/1571:1574
No text annotation
homologous
J3_8C3A_044
NA
J3_5MEI_0431/AR/113:123,
1/AR/149:158,
1/AR/263:267
No text annotation
homologous
J3_8P9A_042
J3_19664.1
J3_5MEI_0791/AR/113:124,
1/AR/144:158,
1/AR/263:267
No text annotation
J3_5MEI_0801/AR/185:189,
1/AR/205:214,
1/AR/226:231
No text annotation
homologous
J3_8P9A_044
J3_75408.1
J3_5MEI_0811/AR/340:356,
1/AR/363:368,
1/AT/21:24
No text annotation
homologous
J3_8P9A_045
J3_30040.2
J3_5MEI_0441/AR/369:376,
1/AR/403:404,
1/AT/19:20
No text annotation
homologous
J3_5TBW_002
NA
J3_5MEI_0821/AR/369:379,
1/AR/390:404,
1/AT/19:20
No text annotation
homologous
J3_8P9A_047
J3_92134.2
J3_5MEI_0451/AR/502:503,
1/AR/588:597,
1/AR/606:611
No text annotation
homologous
J3_5TBW_003
NA
J3_5MEI_0461/AR/814:820,
1/AR/905:907,
1/AR/923:926
No text annotation
homologous
J3_5TBW_004
NA
J3_5MEI_0471/AR/828:831,
1/AR/863:867,
1/AR/892:897
No text annotation
homologous
J3_5TBW_005
NA
J3_5MEI_0481/AR/986:987,
1/AR/1062:1066,
1/AR/1092:1098
No text annotation
homologous
J3_5TBW_006
NA
J3_5MEI_0491/AR/1230:1232,
1/AR/1256:1262,
1/AR/1277:1279
No text annotation
homologous
J3_5TBW_007
NA
J3_5MEI_0501/AR/1479:1485,
1/AR/1857:1859,
1/AR/1871:1874
No text annotation
homologous
J3_5TBW_008
NA
J3_5MEI_0511/AR/1488:1491,
1/AR/1837:1843,
1/AR/1852:1854
No text annotation
homologous
J3_5TBW_009
NA
J3_5MEI_0521/AR/1526:1531,
1/AR/1591:1595,
1/AR/1612:1613
No text annotation
homologous
J3_5TBW_010
NA
J3_5MEI_0831/AR/1537:1542,
1/AR/1551:1566,
1/AR/1572:1584
No text annotation
J3_5MEI_0531/AR/1631:1632,
1/AR/1641:1645,
1/AR/1810:1811
No text annotation
homologous
J3_8C3A_054
NA
J3_5MEI_0841/AR/1654:1658,
1/AR/1791:1792,
1/AR/1796:1801
No text annotation
homologous
J3_8P9A_058
J3_12393.2
J3_5MEI_0541/AR/2432:2435,
1/AR/2512:2517,
1/AR/2590:2597
No text annotation
homologous
J3_5TBW_012
NA
J3_5MEI_0861/AR/2651:2653,
1/AR/2754:2765,
1/AR/2793:2798
No text annotation
homologous
J3_8P9A_061
J3_20992.1
J3_5MEI_0551/AR/2664:2666,
1/AR/2690:2692,
1/AR/2701:2706
No text annotation
homologous
J3_5TBW_013
NA
J3_5MEI_0561/AR/2886:2889,
1/AR/2914:2916,
1/AR/2930:2936
No text annotation
homologous
J3_8P9A_063
J3_62630.1
J3_5MEI_0871/AR/3171:3176,
1/AR/3212:3220,
1/AR/3265:3279
No text annotation
homologous
J3_8P9A_064
J3_03190.1
J3_5MEI_0571/AR/3298:3300,
1/AR/3314:3318,
1/AR/3388:3390
No text annotation
homologous
J3_5TBW_015
NA
J3_5MEI_0581/AS/9:14,
1/AS/66:67,
1/AS/111:112
No text annotation
homologous
J3_5TBW_045
NA
J3_5MEI_0881/AT/44:45,
1/AT/58:64,
1/AT/96:100
No text annotation
homologous
J3_8P9A_067
J3_35667.2
J4_5MEI_0011/1/112:113,
1/1/267:272,
1/1/293:299,
1/1/316:319
No text annotation
homologous
J4_8P9A_012
J4_45801.6
J4_5MEI_0021/1/185:189,
1/1/205:208,
1/1/212:214,
1/1/226:231
No text annotation
homologous
J4_8P9A_013
J4_12410.1
J4_5MEI_0031/1/1451:1457,
1/1/1475:1476,
1/1/1877:1880,
1/1/2352:2353
No text annotation
homologous
J4_8P9A_014
J4_87855.1
J4_5MEI_0041/1/1492:1496,
1/1/1520:1525,
1/1/1614:1615,
1/1/1829:1836
No text annotation
homologous
J4_8P9A_015
J4_69051.6
J4_5MEI_0051/1/1674:1675,
1/1/1693:1694,
1/1/1752:1753,
1/1/1772:1773
No text annotation
homologous
J4_8C3A_005
NA
J4_5MEI_0061/1/2130:2134,
1/1/2146:2150,
1/1/2186:2190,
1/1/2317:2322
No text annotation
homologous
J4_8P9A_017
J4_07509.2
J4_5MEI_0071/1/2192:2194,
1/1/2248:2249,
1/1/2267:2276,
1/1/2310:2315
No text annotation
homologous
J4_8C3A_007
NA
J4_5MEI_0081/1/2654:2658,
1/1/2712:2716,
1/1/2740:2742,
1/1/2751:2753
No text annotation
homologous
J4_8P9A_019
J4_04930.6
J4_5MEI_0091/1/3010:3012,
1/1/3042:3043,
1/1/3098:3100,
1/1/3134:3136
No text annotation
homologous
J4_8P9A_020
J4_65356.1
J4_5MEI_0101/6/99:107,
1/6/307:309,
1/6/357:361,
1/6/383:384
No text annotation
homologous
J4_8P9A_021
J4_15241.1
J4_5MEI_0111/6/622:624,
1/6/975:980,
1/6/1021:1032,
1/6/1103:1104
No text annotation
homologous
J4_8P9A_022
J4_61885.6
J4_5MEI_0121/A/99:107,
1/A/307:309,
1/A/357:361,
1/A/383:384
No text annotation
homologous
J4_8P9A_021
J4_15241.1
J4_5MEI_0131/A/622:624,
1/A/975:980,
1/A/1021:1032,
1/A/1103:1104
No text annotation
homologous
J4_8P9A_022
J4_61885.6
J4_5MEI_0141/AR/112:113,
1/AR/267:272,
1/AR/293:299,
1/AR/316:319
No text annotation
homologous
J4_8P9A_012
J4_45801.6
J4_5MEI_0151/AR/185:189,
1/AR/205:208,
1/AR/212:214,
1/AR/226:231
No text annotation
homologous
J4_8P9A_013
J4_12410.1
J4_5MEI_0161/AR/1451:1457,
1/AR/1475:1476,
1/AR/1877:1880,
1/AR/2352:2353
No text annotation
homologous
J4_8P9A_014
J4_87855.1
J4_5MEI_0171/AR/1492:1496,
1/AR/1520:1525,
1/AR/1614:1615,
1/AR/1829:1836
No text annotation
homologous
J4_8P9A_015
J4_69051.6
J4_5MEI_0181/AR/1674:1675,
1/AR/1693:1694,
1/AR/1752:1753,
1/AR/1772:1773
No text annotation
homologous
J4_8P9A_016
J4_24280.2
J4_5MEI_0191/AR/2130:2134,
1/AR/2146:2150,
1/AR/2186:2190,
1/AR/2317:2322
No text annotation
homologous
J4_8P9A_017
J4_07509.2
J4_5MEI_0201/AR/2192:2194,
1/AR/2248:2249,
1/AR/2267:2276,
1/AR/2310:2315
No text annotation
homologous
J4_8P9A_018
J4_93343.1
J4_5MEI_0231/AR/2654:2658,
1/AR/2712:2716,
1/AR/2740:2742,
1/AR/2751:2753
No text annotation
homologous
J4_8P9A_019
J4_04930.6
J4_5MEI_0221/AR/3010:3012,
1/AR/3042:3043,
1/AR/3098:3100,
1/AR/3134:3136
No text annotation
homologous
J4_8P9A_020
J4_65356.1
J5_5MEI_0011/1/20:22,
1/4/35:42,
1/4/102:107,
1/4/115:116,
1/4/137:139
No text annotation
homologous
J5_8P9A_010
J5_01737.2
J5_5MEI_0021/1/658:663,
1/1/799:802,
1/1/941:944,
1/1/1375:1376,
1/1/1431:1437
No text annotation
homologous
J5_8P9A_011
J5_63811.1
J5_5MEI_0031/1/675:678,
1/1/702:706,
1/1/713:721,
1/1/749:751,
1/1/782:787
No text annotation
homologous
J5_8P9A_012
J5_23272.1
J5_5MEI_0041/1/1906:1914,
1/1/1938:1939,
1/1/2109:2110,
1/1/2114:2122,
1/1/2331:2333
No text annotation
homologous
J5_8P9A_013
J5_62523.6
J5_5MEI_0051/1/2399:2406,
1/1/2815:2823,
1/1/2867:2876,
1/1/2951:2957,
1/1/2975:2980
No text annotation
J5_5MEI_0061/1/2416:2419,
1/1/2611:2614,
1/1/2627:2628,
1/1/2650:2651,
1/1/2798:2804
No text annotation
homologous
J5_8P9A_015
J5_08912.1
J5_5MEI_0071/6/31:35,
1/6/473:479,
1/6/509:516,
1/6/536:546,
1/6/592:595
No text annotation
J5_5MEI_0081/6/54:57,
1/6/90:97,
1/6/386:388,
1/6/409:411,
1/6/422:426
No text annotation
homologous
J5_8P9A_017
J5_59910.6
J5_5MEI_0091/6/636:641,
1/6/693:698,
1/6/740:744,
1/6/807:817,
1/6/854:860
No text annotation
J5_5MEI_0101/A/31:35,
1/A/473:479,
1/A/509:516,
1/A/536:546,
1/A/592:595
No text annotation
J5_5MEI_0111/A/54:57,
1/A/90:97,
1/A/386:388,
1/A/409:411,
1/A/422:426
No text annotation
homologous
J5_8P9A_017
J5_59910.6
J5_5MEI_0211/A/124:143,
1/A/172:182,
1/A/203:204,
1/A/263:265,
1/A/289:293
No text annotation
J5_5MEI_0221/A/124:143,
1/A/172:182,
1/A/203:204,
1/A/263:267,
1/A/288:293
No text annotation
J5_5MEI_0141/A/636:641,
1/A/693:698,
1/A/740:744,
1/A/807:817,
1/A/854:860
No text annotation
J5_5MEI_0151/AR/20:22,
1/AT/35:42,
1/AT/102:107,
1/AT/115:116,
1/AT/137:139
No text annotation
homologous
J5_8P9A_010
J5_01737.2
J5_5MEI_0161/AR/658:663,
1/AR/799:802,
1/AR/941:944,
1/AR/1375:1376,
1/AR/1431:1437
No text annotation
homologous
J5_8P9A_011
J5_63811.1
J5_5MEI_0171/AR/675:678,
1/AR/702:706,
1/AR/713:721,
1/AR/749:751,
1/AR/782:787
No text annotation
homologous
J5_8P9A_012
J5_23272.1
J5_5MEI_0181/AR/1906:1914,
1/AR/1938:1939,
1/AR/2109:2110,
1/AR/2114:2122,
1/AR/2331:2333
No text annotation
homologous
J5_8P9A_013
J5_62523.6
J5_5MEI_0191/AR/2399:2406,
1/AR/2815:2823,
1/AR/2867:2876,
1/AR/2951:2957,
1/AR/2975:2980
No text annotation
J5_5MEI_0201/AR/2416:2419,
1/AR/2611:2614,
1/AR/2627:2628,
1/AR/2650:2651,
1/AR/2798:2804
No text annotation
homologous
J5_8P9A_015
J5_08912.1
J6_5MEI_0011/1/22:27,
1/1/58:68,
1/1/75:79,
1/1/106:110,
1/1/321:331,
1/4/32:35
No text annotation
J6_5MEI_0021/1/2416:2419,
1/1/2611:2614,
1/1/2627:2628,
1/1/2650:2653,
1/1/2754:2765,
1/1/2793:2804
No text annotation
J6_5MEI_0031/AR/22:27,
1/AR/58:68,
1/AR/75:79,
1/AR/106:110,
1/AR/321:331,
1/AT/32:35
No text annotation
J6_5MEI_0041/AR/2416:2419,
1/AR/2611:2614,
1/AR/2627:2628,
1/AR/2650:2653,
1/AR/2754:2765,
1/AR/2793:2804
No text annotation
J7_5MEI_0011/1/949:954,
1/1/967:968,
1/1/1114:1117,
1/1/1141:1146,
1/1/1157:1161,
1/1/1338:1339,
1/1/1365:1370
No text annotation
J7_5MEI_0021/AR/949:954,
1/AR/967:968,
1/AR/1114:1117,
1/AR/1141:1146,
1/AR/1157:1161,
1/AR/1338:1339,
1/AR/1365:1370
No text annotation

Problematic loops

#loop idProblemSequence
J3_5MEI_063No text annotation
J3_5MEI_064No text annotation
J3_5MEI_072No text annotation
J3_5MEI_077No text annotation
J3_5MEI_085No text annotation
J4_5MEI_021No text annotation
J5_5MEI_012No text annotation
J5_5MEI_013No text annotation

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