HL_5MEI_200

3D structure

PDB id

5MEI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Agelastatin A bound to the 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GAGACAUAGUUUC

Length

13 nucleotides

Bulged bases

5MEI|1|AR|U|2501

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MEI|1|AR|G|2440
5MEI|1|AR|A|2441
5MEI|1|AR|G|2442
5MEI|1|AR|A|2443
5MEI|1|AR|C|2444
5MEI|1|AR|A|2445
5MEI|1|AR|U|2501
5MEI|1|AR|A|2502
5MEI|1|AR|G|2503
5MEI|1|AR|U|2504
5MEI|1|AR|U|2505
5MEI|1|AR|U|2506
5MEI|1|AR|C|2507

Current chains

Chain AR

25S ribosomal RNA

Nearby chains

Chain DK

60S ribosomal protein L36-A