HL_5MLC_022
3D structure
- PDB id
- 5MLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGUUGAAGAA
- Length
- 10 nucleotides
- Bulged bases
- 5MLC|1|A|U|758, 5MLC|1|A|G|762
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5MLC_022 not in the Motif Atlas
- Homologous match to HL_4WF9_023
- Geometric discrepancy: 0.142
- The information below is about HL_4WF9_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
5MLC|1|A|U|755
5MLC|1|A|G|756
5MLC|1|A|U|757
5MLC|1|A|U|758
5MLC|1|A|G|759
5MLC|1|A|A|760
5MLC|1|A|A|761
5MLC|1|A|G|762
5MLC|1|A|A|763
5MLC|1|A|A|764
Current chains
- Chain A
- 23S ribosomal RNA, chloroplastic
Nearby chains
- Chain 2
- 50S ribosomal protein L32, chloroplastic
- Chain 4
- 50S ribosomal protein L34, chloroplastic
- Chain E
- 50S ribosomal protein L3, chloroplastic
- Chain U
- 50S ribosomal protein L22, chloroplastic
Coloring options: