HL_5MMI_016

3D structure

PDB id

5MMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the chloroplast ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGACCAGAC

Length

9 nucleotides

Bulged bases

5MMI|1|A|C|557, 5MMI|1|A|G|559

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MMI|1|A|G|553
5MMI|1|A|G|554
5MMI|1|A|A|555
5MMI|1|A|C|556
5MMI|1|A|C|557
5MMI|1|A|A|558
5MMI|1|A|G|559
5MMI|1|A|A|560
5MMI|1|A|C|561

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L13, chloroplastic

Chain S

50S ribosomal protein L21, chloroplastic

Chain T

50S ribosomal protein L22, chloroplastic