HL_5MMI_022
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGUUGAAGAA
- Length
- 10 nucleotides
- Bulged bases
- 5MMI|1|A|U|758, 5MMI|1|A|G|762, 5MMI|1|A|A|763
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5MMI_022 not in the Motif Atlas
- Homologous match to HL_7A0S_022
- Geometric discrepancy: 0.0997
- The information below is about HL_7A0S_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
5MMI|1|A|U|755
5MMI|1|A|G|756
5MMI|1|A|U|757
5MMI|1|A|U|758
5MMI|1|A|G|759
5MMI|1|A|A|760
5MMI|1|A|A|761
5MMI|1|A|G|762
5MMI|1|A|A|763
5MMI|1|A|A|764
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L32, chloroplastic
- Chain 3
- 50S ribosomal protein L34, chloroplastic
- Chain D
- plastid ribosomal protein uL3c
- Chain T
- 50S ribosomal protein L22, chloroplastic
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