HL_5MMI_023

3D structure

PDB id

5MMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the chloroplast ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAAAUG

Length

7 nucleotides

Bulged bases

5MMI|1|A|A|792, 5MMI|1|A|U|795

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MMI_023 not in the Motif Atlas

Homologous match to HL_7RQB_024

Geometric discrepancy: 0.0761

The information below is about HL_7RQB_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74322.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

4

Unit IDs

5MMI|1|A|U|790
5MMI|1|A|G|791
5MMI|1|A|A|792
5MMI|1|A|A|793
5MMI|1|A|A|794
5MMI|1|A|U|795
5MMI|1|A|G|796

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2, chloroplastic