HL_5MMI_037

3D structure

PDB id

5MMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the chloroplast ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AAAGAUGGUUAU

Length

12 nucleotides

Bulged bases

5MMI|1|A|A|1474, 5MMI|1|A|U|1475, 5MMI|1|A|A|1480

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MMI|1|A|A|1470
5MMI|1|A|A|1471
5MMI|1|A|A|1472
5MMI|1|A|G|1473
5MMI|1|A|A|1474
5MMI|1|A|U|1475
5MMI|1|A|G|1476
5MMI|1|A|G|1477
5MMI|1|A|U|1478
5MMI|1|A|U|1479
5MMI|1|A|A|1480
5MMI|1|A|U|1481

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain O

plastid ribosomal protein bL17c

Chain W

4.5S ribosomal RNA