HL_5MMI_064

3D structure

PDB id

5MMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the chloroplast ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MMI_064 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.2788

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

5MMI|1|A|C|2568
5MMI|1|A|U|2569
5MMI|1|A|G|2570
5MMI|1|A|U|2571
5MMI|1|A|U|2572
5MMI|1|A|C|2573
5MMI|1|A|G|2574

Current chains

Chain A

23S ribosomal RNA

Nearby chains