HL_5MMI_071
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAGACGAG
- Length
- 9 nucleotides
- Bulged bases
- 5MMI|1|W|G|16
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5MMI_071 not in the Motif Atlas
- Geometric match to HL_5J7L_201
- Geometric discrepancy: 0.1025
- The information below is about HL_5J7L_201
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64690.6
- Basepair signature
- cWW-cSW-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
5MMI|1|W|C|15
5MMI|1|W|G|16
5MMI|1|W|A|17
5MMI|1|W|G|18
5MMI|1|W|A|19
5MMI|1|W|C|20
5MMI|1|W|G|21
5MMI|1|W|A|22
5MMI|1|W|G|23
Current chains
- Chain W
- 4.5S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L32, chloroplastic
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain D
- plastid ribosomal protein uL3c
- Chain O
- plastid ribosomal protein bL17c
Coloring options: