HL_5MRC_020

3D structure

PDB id

5MRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.25 Å

Loop

Sequence

GAAACAGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MRC_020 not in the Motif Atlas

Homologous match to HL_4WF9_028

Geometric discrepancy: 0.1383

The information below is about HL_4WF9_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47171.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

5MRC|1|A|G|904
5MRC|1|A|A|905
5MRC|1|A|A|906
5MRC|1|A|A|907
5MRC|1|A|C|908
5MRC|1|A|A|909
5MRC|1|A|G|910
5MRC|1|A|C|911

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain U

uL30m

Chain c

mL60