HL_5MRE_003

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

GUAAAC

Length

6 nucleotides

Bulged bases

5MRE|1|A|A|155

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MRE_003 not in the Motif Atlas

Geometric match to HL_5TBW_006

Geometric discrepancy: 0.1037

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

5MRE|1|A|G|153
5MRE|1|A|U|154
5MRE|1|A|A|155
5MRE|1|A|A|156
5MRE|1|A|A|157
5MRE|1|A|C|158

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain 3

mL41

Chain P

uL23m

Chain Q

uL24m

Chain Y

bL34m