HL_5MRE_025

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

UAUUA

Length

5 nucleotides

Bulged bases

5MRE|1|A|A|1255, 5MRE|1|A|U|1257

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MRE_025 not in the Motif Atlas

Geometric match to HL_5J7L_204

Geometric discrepancy: 0.1121

The information below is about HL_5J7L_204

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

5MRE|1|A|U|1254
5MRE|1|A|A|1255
5MRE|1|A|U|1256
5MRE|1|A|U|1257
5MRE|1|A|A|1258

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain 4

mL43

Chain J

uL15m

Chain N

bL21m