HL_5MRE_051

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

UGAUUGUAAA

Length

10 nucleotides

Bulged bases

5MRE|1|A|A|2673

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MRE_051 not in the Motif Atlas

Homologous match to HL_5J7L_192

Geometric discrepancy: 0.1512

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

5MRE|1|A|U|2671
5MRE|1|A|G|2672
5MRE|1|A|A|2673
5MRE|1|A|U|2674
5MRE|1|A|U|2675
5MRE|1|A|G|2676
5MRE|1|A|U|2677
5MRE|1|A|A|2678
5MRE|1|A|A|2679
5MRE|1|A|A|2680

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain J

uL15m

Chain b

mL59