HL_5MRE_054

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MRE_054 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.1663

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

5MRE|1|A|C|2818
5MRE|1|A|U|2819
5MRE|1|A|G|2820
5MRE|1|A|U|2821
5MRE|1|A|U|2822
5MRE|1|A|C|2823
5MRE|1|A|G|2824

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain I

uL14m