HL_5MRF_033
3D structure
- PDB id
- 5MRF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.97 Å
Loop
- Sequence
- UUUACUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 5MRF|1|A|A|1687, 5MRF|1|A|C|1688, 5MRF|1|A|U|1689, 5MRF|1|A|A|1693
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5MRF_033 not in the Motif Atlas
- Homologous match to HL_5J7L_178
- Geometric discrepancy: 0.0786
- The information below is about HL_5J7L_178
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01962.2
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
5MRF|1|A|U|1684
5MRF|1|A|U|1685
5MRF|1|A|U|1686
5MRF|1|A|A|1687
5MRF|1|A|C|1688
5MRF|1|A|U|1689
5MRF|1|A|A|1690
5MRF|1|A|A|1691
5MRF|1|A|A|1692
5MRF|1|A|A|1693
5MRF|1|A|A|1694
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain B
- uL2m
- Chain Y
- bL34m
Coloring options: