HL_5MRF_037

3D structure

PDB id

5MRF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class C

Experimental method

ELECTRON MICROSCOPY

Resolution

4.97 Å

Loop

Sequence

UAUAAUUGA

Length

9 nucleotides

Bulged bases

5MRF|1|A|U|1855

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MRF_037 not in the Motif Atlas

Homologous match to HL_5J7L_182

Geometric discrepancy: 0.2055

The information below is about HL_5J7L_182

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

5MRF|1|A|U|1849
5MRF|1|A|A|1850
5MRF|1|A|U|1851
5MRF|1|A|A|1852
5MRF|1|A|A|1853
5MRF|1|A|U|1854
5MRF|1|A|U|1855
5MRF|1|A|G|1856
5MRF|1|A|A|1857

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain I

uL14m

Chain aa

Small subunit ribosomal RNA; SSU rRNA