HL_5MRF_051

3D structure

PDB id

5MRF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class C

Experimental method

ELECTRON MICROSCOPY

Resolution

4.97 Å

Loop

Sequence

UGAUUGUAAA

Length

10 nucleotides

Bulged bases

5MRF|1|A|A|2673

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5MRF_051 not in the Motif Atlas

Homologous match to HL_5J7L_192

Geometric discrepancy: 0.1513

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

5MRF|1|A|U|2671
5MRF|1|A|G|2672
5MRF|1|A|A|2673
5MRF|1|A|U|2674
5MRF|1|A|U|2675
5MRF|1|A|G|2676
5MRF|1|A|U|2677
5MRF|1|A|A|2678
5MRF|1|A|A|2679
5MRF|1|A|A|2680

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain J

uL15m

Chain b

mL59