HL_5NCO_016
3D structure
- PDB id
- 5NCO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Quaternary complex between SRP, SR, and SecYEG bound to the translating ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- CGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- 5NCO|1|A|C|490
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5NCO_016 not in the Motif Atlas
- Homologous match to HL_5J7L_148
- Geometric discrepancy: 0.1073
- The information below is about HL_5J7L_148
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
5NCO|1|A|C|487
5NCO|1|A|G|488
5NCO|1|A|G|489
5NCO|1|A|C|490
5NCO|1|A|G|491
5NCO|1|A|A|492
5NCO|1|A|G|493
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain T
- 50S ribosomal protein L22
- Chain i
- Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein
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