HL_5NGM_029

3D structure

PDB id

5NGM (explore in PDB, NAKB, or RNA 3D Hub)

Description

2.9S structure of the 70S ribosome composing the S. aureus 100S complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUGGCUUAGAAGCAGCCAUC

Length

21 nucleotides

Bulged bases

5NGM|1|AA|A|1114, 5NGM|1|AA|G|1115, 5NGM|1|AA|C|1116

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NGM|1|AA|G|1103
5NGM|1|AA|U|1104
5NGM|1|AA|U|1105
5NGM|1|AA|G|1106
5NGM|1|AA|G|1107
5NGM|1|AA|C|1108
5NGM|1|AA|U|1109
5NGM|1|AA|U|1110
5NGM|1|AA|A|1111
5NGM|1|AA|G|1112
5NGM|1|AA|A|1113
5NGM|1|AA|A|1114
5NGM|1|AA|G|1115
5NGM|1|AA|C|1116
5NGM|1|AA|A|1117
5NGM|1|AA|G|1118
5NGM|1|AA|C|1119
5NGM|1|AA|C|1120
5NGM|1|AA|A|1121
5NGM|1|AA|U|1122
5NGM|1|AA|C|1123

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains