HL_5NGM_096

3D structure

PDB id

5NGM (explore in PDB, NAKB, or RNA 3D Hub)

Description

2.9S structure of the 70S ribosome composing the S. aureus 100S complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUGACAAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NGM|1|Aa|G|1174
5NGM|1|Aa|U|1175
5NGM|1|Aa|G|1176
5NGM|1|Aa|A|1177
5NGM|1|Aa|C|1178
5NGM|1|Aa|A|1179
5NGM|1|Aa|A|1180
5NGM|1|Aa|A|1181
5NGM|1|Aa|C|1182

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Ab

30S ribosomal protein S2

Chain Av

Ribosome hibernation promoting factor