HL_5NP6_064

3D structure

PDB id

5NP6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S structure prior to bypassing

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGACGCUUAUGCGUUG

Length

16 nucleotides

Bulged bases

5NP6|1|Y|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NP6|1|Y|C|1167
5NP6|1|Y|G|1168
5NP6|1|Y|A|1169
5NP6|1|Y|C|1170
5NP6|1|Y|G|1171
5NP6|1|Y|C|1172
5NP6|1|Y|U|1173
5NP6|1|Y|U|1174
5NP6|1|Y|A|1175
5NP6|1|Y|U|1176
5NP6|1|Y|G|1177
5NP6|1|Y|C|1178
5NP6|1|Y|G|1179
5NP6|1|Y|U|1180
5NP6|1|Y|U|1181
5NP6|1|Y|G|1182

Current chains

Chain Y

23S ribosomal RNA

Nearby chains

Chain j

50S ribosomal protein L15

Chain x

50S ribosomal protein L30