HL_5NWY_013
3D structure
- PDB id
- 5NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAGCCG
- Length
- 6 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5NWY_013 not in the Motif Atlas
- Geometric match to HL_4WF9_003
- Geometric discrepancy: 0.1897
- The information below is about HL_4WF9_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_70546.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 18
Unit IDs
5NWY|1|0|C|522
5NWY|1|0|A|523
5NWY|1|0|G|524
5NWY|1|0|C|525
5NWY|1|0|C|526
5NWY|1|0|G|527
Current chains
- Chain 0
- 16S rRNA
Nearby chains
- Chain B
- 30S ribosomal protein S12
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