HL_5NWY_022
3D structure
- PDB id
- 5NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUCAGAGAUGA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5NWY_022 not in the Motif Atlas
- Geometric match to HL_5TBW_226
- Geometric discrepancy: 0.3971
- The information below is about HL_5TBW_226
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59342.2
- Basepair signature
- cWW-F-F-F-F-cWW-F-F
- Number of instances in this motif group
- 5
Unit IDs
5NWY|1|0|U|1009
5NWY|1|0|U|1010
5NWY|1|0|C|1011
5NWY|1|0|A|1012
5NWY|1|0|G|1013
5NWY|1|0|A|1014
5NWY|1|0|G|1015
5NWY|1|0|A|1016
5NWY|1|0|U|1017
5NWY|1|0|G|1018
5NWY|1|0|A|1019
Current chains
- Chain 0
- 16S rRNA
Nearby chains
- Chain D
- 30S ribosomal protein S14
- Chain I
- 30S ribosomal protein S19
Coloring options: