HL_5O61_027

3D structure

PDB id

5O61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The complete structure of the Mycobacterium smegmatis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.31 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

5O61|1|A|U|942, 5O61|1|A|G|945

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5O61_027 not in the Motif Atlas

Homologous match to HL_5J7L_157

Geometric discrepancy: 0.1881

The information below is about HL_5J7L_157

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.3

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

5O61|1|A|U|941
5O61|1|A|U|942
5O61|1|A|U|943
5O61|1|A|A|944
5O61|1|A|G|945
5O61|1|A|G|946

Current chains

Chain A

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L15