HL_5O61_046
3D structure
- PDB id
- 5O61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The complete structure of the Mycobacterium smegmatis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- CUUCGG
- Length
- 6 nucleotides
- Bulged bases
- 5O61|1|A|U|1911
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5O61_046 not in the Motif Atlas
- Homologous match to HL_5J7L_175
- Geometric discrepancy: 0.1115
- The information below is about HL_5J7L_175
- Detailed Annotation
- UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_34617.5
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 57
Unit IDs
5O61|1|A|C|1909
5O61|1|A|U|1910
5O61|1|A|U|1911
5O61|1|A|C|1912
5O61|1|A|G|1913
5O61|1|A|G|1914
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain BA
- Small subunit ribosomal RNA; SSU rRNA
- Chain BB
- Conserved domain protein
- Chain C
- 50S ribosomal protein L2
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