HL_5ON6_096
3D structure
- PDB id
- 5ON6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of haemanthamine bound to the 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UAUUUUGUUGGUUUCUA
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5ON6_096 not in the Motif Atlas
- Homologous match to HL_8C3A_210
- Geometric discrepancy: 0.3922
- The information below is about HL_8C3A_210
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_08554.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
5ON6|1|6|U|828
5ON6|1|6|A|829
5ON6|1|6|U|830
5ON6|1|6|U|831
5ON6|1|6|U|832
5ON6|1|6|U|833
5ON6|1|6|G|834
5ON6|1|6|U|835
5ON6|1|6|U|836
5ON6|1|6|G|837
5ON6|1|6|G|838
5ON6|1|6|U|839
5ON6|1|6|U|840
5ON6|1|6|U|841
5ON6|1|6|C|842
5ON6|1|6|U|843
5ON6|1|6|A|844
Current chains
- Chain 6
- 18S ribosomal RNA
Nearby chains
- Chain c1
- 40S ribosomal protein S11-A
- Chain s8
- 40S ribosomal protein S8-A
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