HL_5OOM_028
3D structure
- PDB id
- 5OOM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- UCACAA
- Length
- 6 nucleotides
- Bulged bases
- 5OOM|1|A|C|3157
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5OOM_028 not in the Motif Atlas
- Geometric match to HL_5FMZ_001
- Geometric discrepancy: 0.193
- The information below is about HL_5FMZ_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91813.1
- Basepair signature
- cWW-cSW-F
- Number of instances in this motif group
- 24
Unit IDs
5OOM|1|A|U|3154
5OOM|1|A|C|3155
5OOM|1|A|A|3156
5OOM|1|A|C|3157
5OOM|1|A|A|3158
5OOM|1|A|A|3159
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain L
- 39S ribosomal protein L14, mitochondrial
- Chain O
- 39S ribosomal protein L17, mitochondrial
- Chain Q
- 39S ribosomal protein L19, mitochondrial
Coloring options: