HL_5OT7_004

3D structure

PDB id

5OT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation factor G-ribosome complex captures in the absence of inhibitors.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCCGCCCCUUGGGGUGUG

Length

18 nucleotides

Bulged bases

5OT7|1|1|U|189|||F, 5OT7|1|1|G|189|||G

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5OT7|1|1|C|186
5OT7|1|1|C|187
5OT7|1|1|C|188
5OT7|1|1|G|189
5OT7|1|1|C|189|||A
5OT7|1|1|C|189|||B
5OT7|1|1|C|189|||C
5OT7|1|1|C|189|||D
5OT7|1|1|U|189|||E
5OT7|1|1|U|189|||F
5OT7|1|1|G|189|||G
5OT7|1|1|G|189|||H
5OT7|1|1|G|189|||I
5OT7|1|1|G|189|||J
5OT7|1|1|U|189|||K
5OT7|1|1|G|189|||L
5OT7|1|1|U|190
5OT7|1|1|G|191

Current chains

Chain 1

16S Ribosomal RNA

Nearby chains

Chain P

30S ribosomal protein S17

Chain S

30S ribosomal protein S20