HL_5OT7_008
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CACUGAGACACGGG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5OT7_008 not in the Motif Atlas
- Homologous match to HL_6CZR_079
- Geometric discrepancy: 0.1905
- The information below is about HL_6CZR_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81205.2
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
5OT7|1|1|C|320
5OT7|1|1|A|321
5OT7|1|1|C|322
5OT7|1|1|U|323
5OT7|1|1|G|324
5OT7|1|1|A|325
5OT7|1|1|G|326
5OT7|1|1|A|327
5OT7|1|1|C|328
5OT7|1|1|A|329
5OT7|1|1|C|330
5OT7|1|1|G|331
5OT7|1|1|G|332
5OT7|1|1|G|333
Current chains
- Chain 1
- 16S Ribosomal RNA
Nearby chains
- Chain O
- 30S ribosomal protein S16
- Chain S
- 30S ribosomal protein S20
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