HL_5OT7_009

3D structure

PDB id

5OT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation factor G-ribosome complex captures in the absence of inhibitors.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

5OT7|1|1|A|344

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5OT7_009 not in the Motif Atlas

Homologous match to HL_6CZR_080

Geometric discrepancy: 0.3364

The information below is about HL_6CZR_080

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

58

Unit IDs

5OT7|1|1|C|342
5OT7|1|1|U|343
5OT7|1|1|A|344
5OT7|1|1|C|345
5OT7|1|1|G|346
5OT7|1|1|G|347

Current chains

Chain 1

16S Ribosomal RNA

Nearby chains

Chain U

Elongation factor G

Chain p

50S ribosomal protein L14

Chain u

50S ribosomal protein L19